Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0880 | ATGAATGATCTTGTGGAATTTCATTCTGAAGATTTGCATGCAGGGTTTGTAAATGAACAACAAGAAGAAATTATGGATCAAACACAGATCTGGCTTCATGATCAAAATCAACAACAAAATCATCAAAATTTTCTGTCTGATAATGATGATGATACTTTGATGTTCTACTCCGACTTCCCTCCACTGCCTGATTTTCCATGCATGTCGTCGTCTTCGTCGTCTTCGTCTACTCCTGCTCCGGTTAAAGCCACGGCTTCGTCCTCGTCGTCCTCCTCATCGTCCTCCGCCACTTCATGGGCAGTTTTGAAATCAGATGCTGATGAAATTACTGAAGAAATCAGAACAAATTATGATGCCAACAAATTATCATCGCCTCCGGTAGCGGAGACCGCGTTCACCGGTGGCGGGGATTGTACCGACGATATGATGATGGAGACGTTTGGATACATGGATTTACTCGAAGATAGTAACGAGTTTTTCGATCCGACGTGTATATTTCAGAACGAACAAGAACAACAACAAGAACAACGAGTAGTAGTTGAAGAAGATCAAGAGGGTTTGGAAGATTTGCAATTGGAGAGATTTGAAGAAGTGGAAATGGAGGATTTGATGATGATGCATGGCGGTGAAAGTAAGGATAATGATGATGATAATGGAGGGAAACAAAACGACGTGGTTGAGGAAGAAGATATGGCAAAGGTTTTTTTGGAATGGCTTAGAAGTAATAGAGAAACAGTTTCTGCTGATGATTTGAGGAATGTTAGAATAAAAAAAGCCACCATCGAAAGCGCCGCCCGCCGACTCGGCGGCGGCAAGGAGGGAATGAAACAGCTTTTGAAGCTTGTTCTTCAATGGGTTCAAACAAATCACCTTCACAAGAGGAAATTCAAAGATCTCACTATTGAAACTGATACCCATTTCTTAGGGTTTCAAAATAACCCTAATTCCTCCTCCAACCTCCCTTGGATCCAAACCCCGCCCCCGTTACCGCCTCCGCCTTTGTATTCTCCACCGATGCTCGGATATGTCCCGGCCACTGGCGGAGATGCGTATGGTGTTGGTCGTGGTTTCTCGGATCATTACGGCCAGTTACTTGACTCCTCGTTGTCCTGGAGTAATAACAGTAGTAGCAACAATAATAATAATTTCTCGGGACAGTTTGGACTACCCCCGTCGCATTTCAACTCCTTTGTTGATAATTTTGCGGCGGGGCCTCCCCTGCCACCGCCGCAACCACAAGGTTTTGCAGCGGGGTATGGCGGAGGGCATCAATTCCCATATGTGGGTCAGTATTTTCAAGGGCAGGGTGGTAGTGGTGGCGCCGGTGGCGATAATGGTTTGGTTAGGTTGGATTCCTCAGCAACAAAGGAGGCTCGGAAGAAGAGAATGGCGAGGCAGCGGCGATTCTCTGCACATCATCGCCACCATCATGGTGGCCACCATGGCAACAGCCACCAAGATCAGCATCCGACTCAGATGAATCCTAATGCTTCAGATCATTGCAACATGGCTACAACTGCTCAGCCCAATGCTGGTAACTGGGTCTACTGGCCGTCCCCCAGCGCAGCAGTGGCCTCTTCCGCCACATCGTCCGGATTTCCGGTGGACTCGCAGCCTGTGCAAGCTGTTGATCGGTCTAATTCTTCCATGCAGAATCAGAACTACCCACCACGAATTCCATCTGACCGGCGGCTGGGATGGAAACCAGAGAAAAACTTGAAGTTTCTTTTACAGAAGGTTTTGAAACAAAGTGATGTGGGCAATTTGGGGAGAATTGTACTACCAAAGAAAGAAGCAGAAACCCATCTCCCAGAATTGGAGGCAAGAGATGGGATTTCCATTGCAATGGAAGACATTGGAACTTCAAGAGTTTGGAATATGCGTTATAGGTATTGGCCAAACAACAAAAGCAGAATGTATCTCCTTGAAAATACAGGGGACTTTGTAAGAGCCAATGGACTTCAAGAAGGAGACTTCATTGTCATCTACTCAGACGTCAAGTGTGGGAAATATATGATTCGAGGAGTGAAAGTACGGCAACCGGGGTCGAAACCCGAGAGCAGAAGGCCAGGAAAATCGCAAAGAAGCCATACGACTGCGGCTGCCAATGCGTCGTCACCTTCGCCAACGACCGTCGCAACCCCGAAGAGACACTAA | 2157 | 46.87 | MNDLVEFHSEDLHAGFVNEQQEEIMDQTQIWLHDQNQQQNHQNFLSDNDDDTLMFYSDFPPLPDFPCMSSSSSSSSTPAPVKATASSSSSSSSSSATSWAVLKSDADEITEEIRTNYDANKLSSPPVAETAFTGGGDCTDDMMMETFGYMDLLEDSNEFFDPTCIFQNEQEQQQEQRVVVEEDQEGLEDLQLERFEEVEMEDLMMMHGGESKDNDDDNGGKQNDVVEEEDMAKVFLEWLRSNRETVSADDLRNVRIKKATIESAARRLGGGKEGMKQLLKLVLQWVQTNHLHKRKFKDLTIETDTHFLGFQNNPNSSSNLPWIQTPPPLPPPPLYSPPMLGYVPATGGDAYGVGRGFSDHYGQLLDSSLSWSNNSSSNNNNNFSGQFGLPPSHFNSFVDNFAAGPPLPPPQPQGFAAGYGGGHQFPYVGQYFQGQGGSGGAGGDNGLVRLDSSATKEARKKRMARQRRFSAHHRHHHGGHHGNSHQDQHPTQMNPNASDHCNMATTAQPNAGNWVYWPSPSAAVASSATSSGFPVDSQPVQAVDRSNSSMQNQNYPPRIPSDRRLGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQPGSKPESRRPGKSQRSHTTAAANASSPSPTTVATPKRH | 718 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8795250 | 8798285 | - | CrPI670011_09g008800.1 | Cre09g0880 | 507548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 544 | 564 | - | - | |
Cre09g0880 | 718 | SUPERFAMILY | DNA-binding pseudobarrel domain | 576 | 672 | IPR015300 | - | |
Cre09g0880 | 718 | CDD | BfiI_C_EcoRII_N_B3 | 575 | 676 | - | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 485 | 500 | - | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 679 | 718 | - | - | |
Cre09g0880 | 718 | SMART | B3_2 | 577 | 679 | IPR003340 | GO:0003677(InterPro) | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 67 | 99 | - | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 544 | 558 | - | - | |
Cre09g0880 | 718 | FunFam | B3 domain-containing transcription factor FUS3 | 573 | 687 | - | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 453 | 500 | - | - | |
Cre09g0880 | 718 | Gene3D | - | 573 | 689 | IPR015300 | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 460 | 482 | - | - | |
Cre09g0880 | 718 | MobiDBLite | consensus disorder prediction | 694 | 718 | - | - | |
Cre09g0880 | 718 | Pfam | B3 DNA binding domain | 578 | 674 | IPR003340 | GO:0003677(InterPro) | |
Cre09g0880 | 718 | ProSiteProfiles | B3 DNA-binding domain profile. | 577 | 679 | IPR003340 | GO:0003677(InterPro) | |
Cre09g0880 | 718 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 230 | 686 | IPR044800 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g1922 | Cre-Chr4:36775929 | Cre09g0880 | Cre-Chr9:8795250 | 9.50E-29 | dispersed | |
Cre09g0880 | Cre-Chr9:8795250 | Cre09g1710 | Cre-Chr9:35244575 | 2.70E-33 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54338 | PF02362 | B3 | 1.90E-17 | CL0405 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0880 | K09287 | - | csv:101204282 | 1047.34 |