Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0923 | ATGGGGCGAAAGAAGCCTACTGCAAGGGATGATGACAGCGCCCCTGCGGCAGCCCATGGTGGTGGGAAGTCCAAGAAAAAAACGTTTGCAGTAGACGACGATGAGTACTCCATTGGAACCGAGTTGTCTGAAGAACCCCAGGTTCCGGAGGAGAAGGTCGTGATAACTGGGAAGAAGAAGGGTAAGAAAGGCAATTCAAAAGCTTCACAACTTAAAGAGGATGACGATGACGATGATGTGGATGGTGTTTCAGAAATTGTTATTACCGGGAAGAAGAAGGGCAAGTCGAAGAAGGGTGGAACTAGCAGTGCTTTTACTGCTGCCAGTTTTGGTTTGCTTGAAGAGGAGGGAATGGATGACGATGATGAATCTGTGTTGACTGCAGAAAAGGATGATGATGAAGAGGAAGATTCTGCGATCAAGTTTTCAGGTAAGAAGAAGTCATCCAAATCTTCAAAGAAGAGTGGTTTTTCTGCAGTGTCAGCATTCACTGCCCTTAATGATGAGAATGATGAGGATGTAATTGGTGATGAGGTCAGGGTTGATGAAGATATTGATGATGAGTCTGTTATTGCATTTACTGGTAAGAAGAAGTCATCAAAAGGTGGCAAGAAGGCCGGGAGTGCATTTACAGGTTTTAGTGGTCTTGACTATGAGGACGAGGACAGAGATGATGATAAAGATGGGGATGAAGATGTGACATCAGTTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGCTTCAAAGAAGGGTGGAAATTTGTTTAGTGCAGCATTAGCAGATGAGGAAAATGATGGCGATGTTTCTATTTCAGAGCCAAATAAATTAGACAATGATGGTGTTAATGAAGACGATGTCAATGTTATTGCATTTTCTGGTAAGAAAAAGTCCTCTAAGAAGAAAAGCAGCAGTACTTTTACTGCATTAAATGATGAAAATGCGCAGGGCAATGAAGTTAAGGATGTAGTTGTACCTGAAATACTTAATACAGTAAGTAGCAATCTTGATTCTGATTTATCTAATGCTAACAAGATGGAAGCGGTGGCAGAGACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGCGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTGGCTGAGCTAGGAGAAGGGCCTACCATATCAAAACCAGCAGACCCTCCTCTTTCTTCCCAGGAGGCCAAAGTTGAGAATCCACCTGAGCCAGTAGCTCCTCCTGAAAAGGAAGCTGAAGAAGAGAGCACAGAATCGGCTGCAGCAAGGAAGAAGAAAAAGAAGAAGGAGAAGGAAAAAGAAAAAAAGGCTGCTGCTGCTGCAGCAGCTGCTGAAGGGAATGATGAAAAGATTGAGGAGGTAAAGACTGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGCCGGAGAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAGGAAGCAATGGCTAGAAGAAAAGAAGAAGAAGAGCGAAGGAAAAGGGAGGAGGAAGAGAGATTGAGAAAGGAAGAAGAAGAGAGACGTAGGCTAGAAGAACTCGAAAGGCAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTTTTAAGGAAGAAACAGGAAGGCAAGCTGTTAACAGGTAAACAAAAGGAAGAACAACGGAGGTTGGAGGCAATGAGGAACCAGATTTTATCAAATGCCGGAGGTTTACCTCTGTCTACATCTGACCCTAGTGCACCAGCTAAACGACCAAAATACCAGACAAAGAAGACAAAACCAGCCCATCATCAAACAAATGGAAATGCACAAACGAAGGCAGTGGAGCATACAGAAGAAAAAATACAAGAAAAAGATGTGGCAGAGACAGAAATATTGGAGTCACAGAAGATTGCAGCTGTTGAGTTGATGCATATGGAGGAAAAAGCAGATGTTGTTGAGGCTACAGAAGACAATGAAATTCAAGAAGATGAGGATGAGGATGAATGGGATGCGAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTTGCTGACGAGGAGCTTGAATCAGAACCTGAGAATGGCATGAAAAAAGATACAAAGAATGGTGCAGGTGCCAAGCTAGCTGCCCCTGCTCAAAAAGGTTTCCCTTCTCAGTCTATAAAGTCACAAGATATTGAAAACAAAAAGAAGCAGGACGAGGTTGAGGTTGCCGACAAGGGCAAAAGAAAAGATGATGCTGTTAAGAAAAAAGCTTCAGTCCCAGATGCTACTCCTGTACCACAGGAAGAAAATCTTCGCTCGCCCATATGTTGTATTATGGGTCATGTTGATACTGGTAAAACCAAGCTGCTGGACTGTATCCGTGGTACAAATGTTCAAGAGGGAGAGGCGGGAGGAATTACTCAGCAGATTGGGGCAACATATTTTCCTGCCGAGAACATTCGGGAAAGAACTAGGGAACTGAAGGCTGATGCAAAGCTGAAGGTTCCTGGCCTACTTATTATTGATACCCCTGGGCATGAGTCGTTTACAAACTTACGTTCTCGTGGTTCGGGCTTATGTGATCTTGCAATTTTGGTTGTTGACATCATGCATGGCCTAGAGCCACAAACAATAGAATCTCTTAATCTCTTGAGGATGAGAAATACAGAATTTATTGTTGCTCTGAATAAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCAATTCTTAAGACAATGAAGCAGCAAACCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATTACTCAATTTAAAGAGCAGGGATTGAATACTGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGCATTCCAGACATGTTACTATTATTGGTGCAGTGGGCCCAGAAAACTATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGCACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAATGGTGTGCTGCATGAAGGAGATCAAATTGTTGTTTGTGGGATGCAGGGCCCAATTGTTACTACTATTCGAGCCCTATTGACGCCCCATCCAATGAAGGAACTCCGGGTGAAGGGAACATATCTGCATCATAAGGAAATCAAGGCTGCTCAGGGAATAAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATCAAGGATTCAGCTATGGAAGATATGAAGTCAGTCTTGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGTCCCCGGCAGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGTGTAATGCTTGAAAAGAAAAAAGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATATATCACTTGTTCGACCAATTCAAGGCCTATATTGATAATCTTAAGGAGGAAAAGAAGAAAGAAGCCGCTGAGGAAGCAGTTTTTCCTTGTGTTCTCAAAATTCTACCGAATTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTGATTGAGGGCATTGCCAAGGTTGGCACACCAATTTGTATTCCTCAAAGAGAATTTATTGACATTGGTCGCATTGCATCTATTGAAAATAACCACAAACCTGTTGATTATGCAAAGAAAGGGCAGAAGATTGCTATTAAGATAGTTGGGCACTCTTCGGAGGAGCAACAAAAGATGTATGGTAGACACTTTGATTTGGAGGATGAACTTGTCAGCCATATATCAAGGAAGTCCATTGACCTTCTCAAAGCGAACTATCGGGATGATTTGTCCACGGATGAGTGGAGACTCGTGGTGAAATTGAAGAATCTCTTCAAGATACAGTGA | 4077 | 42.21 | MGRKKPTARDDDSAPAAAHGGGKSKKKTFAVDDDEYSIGTELSEEPQVPEEKVVITGKKKGKKGNSKASQLKEDDDDDDVDGVSEIVITGKKKGKSKKGGTSSAFTAASFGLLEEEGMDDDDESVLTAEKDDDEEEDSAIKFSGKKKSSKSSKKSGFSAVSAFTALNDENDEDVIGDEVRVDEDIDDESVIAFTGKKKSSKGGKKAGSAFTGFSGLDYEDEDRDDDKDGDEDVTSVSFSGKKKKSAKASKKGGNLFSAALADEENDGDVSISEPNKLDNDGVNEDDVNVIAFSGKKKSSKKKSSSTFTALNDENAQGNEVKDVVVPEILNTVSSNLDSDLSNANKMEAVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTISKPADPPLSSQEAKVENPPEPVAPPEKEAEEESTESAAARKKKKKKEKEKEKKAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKSKVPEKKVPKHVREMQEAMARRKEEEERRKREEEERLRKEEEERRRLEELERQAEEAKRRKKEREKEKLLRKKQEGKLLTGKQKEEQRRLEAMRNQILSNAGGLPLSTSDPSAPAKRPKYQTKKTKPAHHQTNGNAQTKAVEHTEEKIQEKDVAETEILESQKIAAVELMHMEEKADVVEATEDNEIQEDEDEDEWDAKSWDDAVVDLSLKSSFADEELESEPENGMKKDTKNGAGAKLAAPAQKGFPSQSIKSQDIENKKKQDEVEVADKGKRKDDAVKKKASVPDATPVPQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKVDRLYGWKTIRNAPILKTMKQQTKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIEGIAKVGTPICIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTDEWRLVVKLKNLFKIQ | 1358 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9304185 | 9317174 | + | CrPI670011_09g009230.1 | Cre09g0923 | 507591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0923 | 1358 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 416 | 1357 | IPR015760 | GO:0003743(PANTHER)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006413(PANTHER) | |
Cre09g0923 | 1358 | SUPERFAMILY | Translation proteins | 1225 | 1357 | IPR009000 | - | |
Cre09g0923 | 1358 | NCBIfam | small GTP-binding protein domain | 771 | 897 | IPR005225 | GO:0005525(InterPro) | |
Cre09g0923 | 1358 | Gene3D | - | 1108 | 1214 | IPR036925 | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 682 | 700 | - | - | |
Cre09g0923 | 1358 | FunFam | eukaryotic translation initiation factor 5B | 989 | 1108 | - | - | |
Cre09g0923 | 1358 | Pfam | Translation-initiation factor 2 | 1095 | 1207 | IPR023115 | - | |
Cre09g0923 | 1358 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1091 | 1220 | IPR036925 | - | |
Cre09g0923 | 1358 | Coils | Coil | 477 | 544 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 269 | 283 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 362 | 377 | - | - | |
Cre09g0923 | 1358 | Pfam | Elongation factor Tu GTP binding domain | 769 | 978 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | Pfam | Elongation factor Tu domain 4 | 1228 | 1301 | IPR029459 | - | |
Cre09g0923 | 1358 | Gene3D | Translation factors | 989 | 1107 | - | - | |
Cre09g0923 | 1358 | Coils | Coil | 1203 | 1223 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 609 | 625 | - | - | |
Cre09g0923 | 1358 | FunFam | Eukaryotic translation initiation factor 5B | 1108 | 1214 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 406 | 427 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 681 | 762 | - | - | |
Cre09g0923 | 1358 | CDD | aeIF5B_II | 990 | 1100 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 109 | 156 | - | - | |
Cre09g0923 | 1358 | CDD | IF2_aeIF5B_IV | 1229 | 1324 | - | - | |
Cre09g0923 | 1358 | CDD | IF2_eIF5B | 769 | 979 | - | - | |
Cre09g0923 | 1358 | FunFam | Eukaryotic translation initiation factor 5B | 1221 | 1358 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 652 | 669 | - | - | |
Cre09g0923 | 1358 | Coils | Coil | 414 | 443 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 647 | 669 | - | - | |
Cre09g0923 | 1358 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 766 | 982 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 114 | 136 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 334 | 625 | - | - | |
Cre09g0923 | 1358 | Gene3D | - | 761 | 988 | IPR027417 | - | |
Cre09g0923 | 1358 | Gene3D | Translation factors | 1221 | 1358 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 334 | 349 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 192 | 321 | - | - | |
Cre09g0923 | 1358 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 766 | 1057 | IPR027417 | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 724 | 752 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 1 | 81 | - | - | |
Cre09g0923 | 1358 | MobiDBLite | consensus disorder prediction | 448 | 561 | - | - | |
Cre09g0923 | 1358 | PRINTS | GTP-binding elongation factor signature | 834 | 844 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | PRINTS | GTP-binding elongation factor signature | 770 | 783 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | PRINTS | GTP-binding elongation factor signature | 886 | 895 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | PRINTS | GTP-binding elongation factor signature | 850 | 861 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g0923 | 1358 | FunFam | Eukaryotic translation initiation factor 5B | 760 | 988 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g0923 | Cre-Chr9:9304185 | Cre11g2038 | Cre-Chr11:32154129 | 1.20E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0923 | K03243 | - | csv:101204360 | 2032.68 |