Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0924 ATGTCAACACTGAGCCAGAGCAGCTCCCTCAACAGTTGCACTAAGTTTCCCCACCCTCCCCATGACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCGGTCCTTGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGCGTCGGTGCCGTCAAGCACGACGTCAAGGCCATGATCCTCACCGGCTTTGCTGGCCTCATTGCCGGTGCCTGCAGCATGGCCATCGGTGAGTTCGTTTCTGTCTACTCTCAATTGGATATAGAAATGGCGCATATAGAAAGAAACAAGGATCATAGGAAGGAGTTGGAGGAAGAGGAGAGAGAGAAACTACCAAACCCTCTTCAGGCGGCAGCGGCTTCGGCCTTGGCCTTTTCCACGGGGGCAATAGTGCCACTGTTGGCCGCAGCGTTCATAAGGCAGTATAGGCTCCGGCTCGGGGTAGTGGTGGTGGCAGTCACAGTGGCGCTGGTAGGGTTCGGTTGGCTGGGTGCAGCATTAGGGAAGGCGCCAACTATCAGGTCCATAGTGAGGGTCTTGATTGGTGGGTGGGCAGCCATGGCTGTAACTTTTGGATTGACTAAGTTGATTGGATCGAGTGGATTATGA 651 54.69 MSTLSQSSSLNSCTKFPHPPHDHVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIERNKDHRKELEEEEREKLPNPLQAAAASALAFSTGAIVPLLAAAFIRQYRLRLGVVVVAVTVALVGFGWLGAALGKAPTIRSIVRVLIGGWAAMAVTFGLTKLIGSSGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9326938 9327588 - CrPI670011_09g009240.1 Cre09g0924 507592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0924 216 Coils Coil 103 123 - -
Cre09g0924 216 MobiDBLite consensus disorder prediction 1 15 - -
Cre09g0924 216 Pfam VIT family 116 208 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cre09g0924 216 Pfam VIT family 42 125 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cre09g0924 216 MobiDBLite consensus disorder prediction 1 22 - -
Cre09g0924 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 213 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0643 Cre-Chr8:19375151 Cre09g0924 Cre-Chr9:9326938 1.40E-73 dispersed
Cre09g0924 Cre-Chr9:9326938 Cre09g1377 Cre-Chr9:22574325 6.10E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0924 K22736 - csv:101210510 365.925