Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0930 ATGTCGTTAGTTAGGCCATCTGATCCATCTCCATTATCATATGGAAGTCGCAAGCTTTACTCGTTGAAGGGAACAAATAATGCTCCTGACTTATCCACACAAAGATTTGGCTCTGAAAAACATAGAACGATGTATATGAATGATACATATTGCAGTGAGAGCTATGAGAAGTATTTCCTCGACTTCCCGATAGAAGAGCCATCGATTTCAGGAATTTCTACCAATTCTTGTCACCCCAACGCTTGGGTTGATTCTCTATCCCCCTTGTGTGATTCATTTACACTTTTTGATGCTTGTCAATCAAATTCAGACTCAGCTTGCCTCGAGAGTACAAGTCCAGACCAACTTGATTTTGAGGATGATCAAGTGAGACTGAAGTTGCAAGAATTGGAGAGAGATCTGCTGGGTGACCCGGATGCTGCAGATTACGATGTTGAGATGCTTGCTAACGGCCAGAGCATGGAAATTGATAGCGAATGGGCAAATTCGATTCAAGATGCACTACTTCATGACTCGCCAAAGGAATCTTCGTCGACAGATTCTAATTTCAGTACCATCAGCAGCAATAAGGATGCATCTCAGATATCTTCACAGAATCCCAGACAAATGCTTTTAGAATGTGCTTTTGCTATCTCAGAGGAGAACTTCAAAGAAGCGTCAGCCATGATAGAACAGCTCCGAGGTATGGTCTCTGTTCAGGGAGATCCCTCACAGAGGATTGCTGCGTATATGGTGGAAGGTCTTGCGGCTCGGTTGTTGGAATCAGGAAAATGTCTTTATAAAGCTTTGAGATGCAAGGAACCACCTTCCTCCGACCGTCTTGCAGCTATGCAGATCCTTTTCGAGGTCTGCCCGTGTTTCAAATTTGGCTTTATGGCTGCAAATTGTGCCATTATTGAGGCAGCGAAAGATGAGAAGAAAATTCACATAATCGATTTTGATGTAAGCCAAGGAACTCAGTACATAAAATTGATTCAGATGCTAGCAGCTCAGCCAGGTAAGCCACCACACTTGAGGTTAACAGGGGTTGATGACCCCGAATCGGTACAGCGCCCCGTTGGAGGTCTTAGGCACATTGGACAAAGACTCGAGCAACTAGCAAAAGCACTGCGGGTTCCATTTGAATTTCGAGCGATTCCCTCAAATGCTTCTGATGTTACTCCCTCAATGCTCGCCTCCCGGCCTGGAGAAGCACTCATAGTGAACTTTGCTTTCTTGCTTCACCACATGCCAGATGAAAGCGTTTCAACCGTAAATCTACGAGACAGGCTTCTCCGTATGGTCAAGAGCTTGAACCCGAAACTAGTAACAGTCGTCGAACAGGACATGAACACAAACACCACCCCATTCTTTTCAAGATTTGTCGAAGCCTATAACTACTACGCAGCTGTTTACAATTCCCTTGATGCAACACTCCCAAGAGATAGTCAAGACAGAATAAATGTAGAAAGGCAATGCTTGGCAAAGGACATAGTCAACATTGTAGCTTGTGAAGGTGAGGAAAGAGTAGAGAGATACGAAGTAGCCGGGAAATGGCGGGCAAGAATGACGATGGCAGGCTTCACTTCCTGTTCAATGAGCAAAAACGTGACCGACCCGATTCGCAAACTGATCCAGGAGTATTGTGACAGATTCAAGATGTATGAGGAAATGGGCACACTTCATTTTGGATGGGAAGAGAAAAGCTTGGTTGTTACTTCGGCATGGAGGTAA 1713 44.66 MSLVRPSDPSPLSYGSRKLYSLKGTNNAPDLSTQRFGSEKHRTMYMNDTYCSESYEKYFLDFPIEEPSISGISTNSCHPNAWVDSLSPLCDSFTLFDACQSNSDSACLESTSPDQLDFEDDQVRLKLQELERDLLGDPDAADYDVEMLANGQSMEIDSEWANSIQDALLHDSPKESSSTDSNFSTISSNKDASQISSQNPRQMLLECAFAISEENFKEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLESGKCLYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFMAANCAIIEAAKDEKKIHIIDFDVSQGTQYIKLIQMLAAQPGKPPHLRLTGVDDPESVQRPVGGLRHIGQRLEQLAKALRVPFEFRAIPSNASDVTPSMLASRPGEALIVNFAFLLHHMPDESVSTVNLRDRLLRMVKSLNPKLVTVVEQDMNTNTTPFFSRFVEAYNYYAAVYNSLDATLPRDSQDRINVERQCLAKDIVNIVACEGEERVERYEVAGKWRARMTMAGFTSCSMSKNVTDPIRKLIQEYCDRFKMYEEMGTLHFGWEEKSLVVTSAWR 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9445925 9447637 + CrPI670011_09g009300.1 Cre09g0930 507598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0930 570 ProSiteProfiles GRAS family profile. 191 570 IPR005202 -
Cre09g0930 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 184 569 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cre09g0930 570 MobiDBLite consensus disorder prediction 171 198 - -
Cre09g0930 570 Pfam GRAS domain family 201 570 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2309 Cre-Chr2:36606469 Cre09g0930 Cre-Chr9:9445925 8.50E-57 dispersed
Cre04g1560 Cre-Chr4:34204842 Cre09g0930 Cre-Chr9:9445925 2.50E-45 dispersed
Cre09g0930 Cre-Chr9:9445925 Cre10g0686 Cre-Chr10:6513436 1.20E-113 dispersed
Cre09g0930 Cre-Chr9:9445925 Cre03g0450 Cre-Chr3:2911442 2.80E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54343 PF03514 GRAS 8.40E-131 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0930 K27748 - csv:101206511 1081.24