Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0959 ATGGCCTTCAGTTCTACAGTAGCATCGCAGCTCCATGTTTTCCGAACCTCCAATCTCCGATTCCCGGACTCCAACAAATCCTGGAATCGGAGACGGCGAAGCACAGCGGTCTCCGTAATCCGGTGCGAGAAGGTCGTGGGAATCGACCTAGGAACGACGAACTCAGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACGATCGTGACGAACGCGGAGGGACAGAGGACGACGCCGTCGGTGGTAGCGTACACGAGGAACGGCGATCGGCTTGTTGGTCAGTTGGCGAAGCGGCAGGCGGTGGTTAATCCGGAGAACACTTTCTTCTCCGTGAAGAGGTTCATTGGAAGGAAAATGGCGGAGGTGGACGAAGAGGCGAAGCAAGTGTCTTACAAGGTTATCGCGGATGAGAATGGGAATGTGAAGCTCGATTGCCCTGCCGTCGGCAAGCAGTTCGCCGCCGAGGAGATTTCCGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAATGATCAAGTAGGAAAAGCTGTAGTAACAGTACCAGCATATTTCAATGACTCTCAAAGAACAGCGACGAAAGATGCTGGTCGCATTGCTGGTCTCGAAGTTCTTCGCATCATCAATGAACCAACTGCTGCTTCACTTGCCTATGGCTTTGACAAGAAAACCAATGAGACCATTCTCGTTTTCGACCTCGGTGGTGGAACGTTTGACGTCTCAGTCCTTGAGGTTGGAGATGGCGTATTTGAGGTGCTTTCTACTTCAGGCGATACACATTTGGGTGGAGATGATTTTGACAAGAGGATTGTCGATTGGCTCGCCGAGAGCTTTAAGAGGGATGAAGGAATTGATCTTCTGAAAGACAAACAAGCGCTGCAACGTTTAACGGAAACTGCTGAGAAGGCAAAGATTGAGTTATCATCTTTAACACAGACCAATATTAGTTTGCCATTTATCACTGCAACCAGCGACGGCCCCAAACATATTGATACTACGCTTACTAGGGTCAAGTTTGAAGAGTTATGTTCAGACTTGCTAGATAGGCTGCGATCACCGGTTGAAACGGCTCTAAAGGATGCAAAGTTGTCGTTCAAAGATATAGATGAAGTCATTCTTGTTGGGGGCTCGACTCGTATCCCAGCAGTTCAGGAGCTTGTCAAGAAAATGACAGGGAAAGAACCGAATATGACTGTAAATCCTGATGAAGTGGTTGCTCTCGGGGCCGCAGTTCAGGCTGGTGTTTTGGCTGGAGATGTCAGTGACATTGTTCTCTTAGATGTCACACCTCTCTCTCTCGGTTTGGAAACTTTAGGTGGAGTGATGACCAAAATCATTCCAAGGAACACAACCTTACCAACATCCAAATCGGAGGTGTTTTCAACAGCAGCAGATGGACAAACAAGTGTTGAGATTAACGTATGTCAAGGCGAACGAGAGTTTGTTCGGGACAATAAGTCTCTCGGACGAATTCTCCTGGACGGTATCCCACCCGCACCTCGTGGTGTTCCTCAGATTGAAGTGAAATTTGACATTGATGCTAATGGCATTCTCTCTGTAACTGCCATTGACAAGGGAACCGGGAAGAAGCAGGACATCACAATCACTGGCGCTAGTACTTTACCAAGTGATGAGGTGGACAGAATGGTTAAAGAAGCAGAGAGGTTTGCAAAGGAAGACAAGGAGAAGAGGGATGCCATAGACACAAAGAACCAAGCAGATTCTGTTGTGTACCAAACTGAAAAACAGCTAAAGGAGCTGGGAGACAAAATTCCCACCTCGGTTCGAGATACCGTTGAGGCTAAGCTCAAAGAACTTAAGGATGCCATCTCTAACGGGTCAACTGAAACTATCAAAAACTCCATGGCTGCACTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTATAGCCAAGCCACGGCCTCGAGTGATGGGACTGCGTCAGGAACTCAGTCTACTTCATCAGGATCAGCCGGAGAAACGGATGGGGATGTGGTTGATGCAGATTTTGTGGATAGTGACCGCGATCGTCTCTCTTCTCCTTCACCGTTCTTACCTTGGACCTCTTCATCTTCTTCTCCGGCGAACGCACAAGGTGCTCCGGCGTCTTCTCCTTGCGCGCAAGCGTTTTGCAGACGGGGACCAGACCACATCAACTTCTGTAGCGTAGCATCTGCTTCTAGTGTCTGTTTTGTATCTTTTAAGATGCTTCCTCTTTCGCTCCTAAAGACTGCTCAAGGTCACCCAATGTTGGTGGAGTTGAAAAATGGTGAGACTTACAACGGCCATTTGGTTAATTGTGATACATGGATGAACATTCATCTTCGGGAAGTCATCTGCACTTCAAAAGATGGTGACCGGTTTTGGCGAATGCCTGAATGTTATATCCGTGGTAATACAATCAAGTATTTGCGAGTTCCAGATGAGGTTATTGATAAAGTTCAGGAAGAAGCCAAAAGCCGTGCAGATAGGAAACCTCCAGTGTTAGGGCGTGGAAGAGGAAGAGGGCGTGAGGATGGTCCTGGTGGAAGACCAGCCAAAGGAATGGGCCGAGGCTTTGATGATGGTGCCAAAGCTGCTTCTGGAGGCCGTGGAAAAGGTGGCCCTGGTGGAAAACCTGGTGGCAACAGAGGGGCCGAGGGTGATCGGAGTGATATCGGTAACCAATGGGATGGACCAACTACATATGCAAGCGCTGCCCAGTTTTCTCGTCAGCAGCCGTGTGTTTTCTGTTTTATGCAATGTTCTTTTGGTCTGGATTCTGAAGTGAATATTTATGTGATTTTAGTGCCAGACCTCTGCGGAAGTTGTACACGAGACGAACTATGTTTCAGAGGGGCTTGGGAGGCGGCAATGTGA 2868 48.61 MAFSSTVASQLHVFRTSNLRFPDSNKSWNRRRRSTAVSVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTRNGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVIADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATSDGPKHIDTTLTRVKFEELCSDLLDRLRSPVETALKDAKLSFKDIDEVILVGGSTRIPAVQELVKKMTGKEPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRILLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAERFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKIPTSVRDTVEAKLKELKDAISNGSTETIKNSMAALNQEVMQMGQSLYSQATASSDGTASGTQSTSSGSAGETDGDVVDADFVDSDRDRLSSPSPFLPWTSSSSSPANAQGAPASSPCAQAFCRRGPDHINFCSVASASSVCFVSFKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEAKSRADRKPPVLGRGRGRGREDGPGGRPAKGMGRGFDDGAKAASGGRGKGGPGGKPGGNRGAEGDRSDIGNQWDGPTTYASAAQFSRQQPCVFCFMQCSFGLDSEVNIYVILVPDLCGSCTRDELCFRGAWEAAM 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9833557 9845919 + CrPI670011_09g009590.1 Cre09g0959 507627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0959 955 MobiDBLite consensus disorder prediction 639 663 - -
Cre09g0959 955 FunFam Molecular chaperone DnaK 543 644 - -
Cre09g0959 955 Gene3D - 543 643 IPR029048 -
Cre09g0959 955 ProSitePatterns Heat shock hsp70 proteins family signature 1. 48 55 IPR018181 -
Cre09g0959 955 Pfam Hsp70 protein 45 639 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cre09g0959 955 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 541 IPR029047 -
Cre09g0959 955 Pfam LSM domain 744 808 IPR001163 -
Cre09g0959 955 MobiDBLite consensus disorder prediction 639 702 - -
Cre09g0959 955 MobiDBLite consensus disorder prediction 819 895 - -
Cre09g0959 955 FunFam Molecular chaperone DnaK 46 232 - -
Cre09g0959 955 FunFam U6 snRNA-associated Sm-like protein LSm4 739 821 - -
Cre09g0959 955 Coils Coil 288 315 - -
Cre09g0959 955 CDD HSPA9-Ssq1-like_NBD 42 418 - -
Cre09g0959 955 Gene3D - 221 402 - -
Cre09g0959 955 Gene3D Actin; Chain A, domain 4 265 352 - -
Cre09g0959 955 SUPERFAMILY Sm-like ribonucleoproteins 741 859 IPR010920 -
Cre09g0959 955 MobiDBLite consensus disorder prediction 819 847 - -
Cre09g0959 955 CDD LSm4 740 815 IPR034101 GO:0000398(InterPro)|GO:0000956(InterPro)
Cre09g0959 955 Gene3D - 739 821 - -
Cre09g0959 955 SUPERFAMILY Actin-like ATPase domain 44 224 IPR043129 -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 179 199 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 238 248 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 424 443 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 370 386 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 505 521 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 95 103 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 401 421 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 44 57 - -
Cre09g0959 955 PRINTS 70kDa heat shock protein signature 72 84 - -
Cre09g0959 955 Gene3D - 46 415 - -
Cre09g0959 955 PANTHER HEAT SHOCK PROTEIN 70KDA 45 608 IPR013126 GO:0005524(InterPro)|GO:0009507(PANTHER)|GO:0140662(InterPro)
Cre09g0959 955 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 420 576 IPR029047 -
Cre09g0959 955 SUPERFAMILY Actin-like ATPase domain 227 418 IPR043129 -
Cre09g0959 955 ProSiteProfiles Sm domain profile. 740 813 IPR047575 GO:0003723(InterPro)
Cre09g0959 955 Hamap Chaperone protein DnaK [dnaK]. 42 676 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cre09g0959 955 NCBIfam molecular chaperone DnaK 44 639 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cre09g0959 955 ProSitePatterns Heat shock hsp70 proteins family signature 2. 232 245 IPR018181 -
Cre09g0959 955 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Cre09g0959 955 FunFam Molecular chaperone DnaK 265 352 - -
Cre09g0959 955 MobiDBLite consensus disorder prediction 685 702 - -
Cre09g0959 955 FunFam Chaperone protein DnaK HSP70 414 597 - -
Cre09g0959 955 SMART Sm3 743 809 IPR001163 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1813 Cre-Chr6:19450148 Cre09g0959 Cre-Chr9:9833557 1.50E-305 dispersed
Cre09g0959 Cre-Chr9:9833557 Cre10g1140 Cre-Chr10:23486000 1.10E-183 dispersed
Cre09g0959 Cre-Chr9:9833557 Cre01g0475 Cre-Chr1:4103455 8.20E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0959 K03283 - csv:101212307 1214.52