Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0986 | ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAAACCCAATTCATCGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTGCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGGCTTCCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCTCGATTGCAGGCCAAGAGAATAACTGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCCGCGAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCTACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTATCTCTAGATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTTTAGATCTTGTCAATACCATTGCGACATTTAGGTCCCAGCGAATTGGAATGGTTCAGACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTAGAAGACCTTCTATCTGTTCCACAGTAG | 1191 | 44.67 | MIKQAHSLIQIPNETQFIGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKLCSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYTDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISRWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIATFRSQRIGMVQTLDQYFFCYRTIVDELEDLLSVPQ | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10132167 | 10137833 | + | CrPI670011_09g009860.1 | Cre09g0986 | 507654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0986 | 396 | PANTHER | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE | 57 | 388 | IPR050348 | GO:0004725(PANTHER) | |
Cre09g0986 | 396 | CDD | PTPc_plant_PTP1 | 179 | 381 | - | - | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 370 | 380 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 196 | 216 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 321 | 339 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 283 | 300 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 178 | 185 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | PRINTS | Protein tyrosine phosphatase signature | 354 | 369 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | MobiDBLite | consensus disorder prediction | 47 | 88 | - | - | |
Cre09g0986 | 396 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 303 | 378 | IPR000387 | GO:0016311(InterPro) | |
Cre09g0986 | 396 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 94 | 390 | IPR029021 | - | |
Cre09g0986 | 396 | Pfam | Protein-tyrosine phosphatase | 147 | 385 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | ProSiteProfiles | PTP type protein phosphatase domain profile. | 118 | 387 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | SMART | PTPc_3 | 117 | 389 | IPR000242 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Cre09g0986 | 396 | MobiDBLite | consensus disorder prediction | 66 | 81 | - | - | |
Cre09g0986 | 396 | Gene3D | Protein tyrosine phosphatase superfamily | 94 | 393 | IPR029021 | - | |
Cre09g0986 | 396 | FunFam | Tyrosine-protein phosphatase non-receptor type 12 | 95 | 394 | - | - | |
Cre09g0986 | 396 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 324 | 334 | IPR016130 | GO:0016311(InterPro) | |
Cre09g0986 | 396 | SMART | ptp_7 | 284 | 386 | IPR003595 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0986 | - | - | - | 0.0 |