Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0986 ATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAAACCCAATTCATCGGATTCAAAAGCATTGGCAGAGTCAGATTCTGTTTGTCGATCCTGCAATCCTCCGCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGCAACCACCATCGCCGGCCTCCCATGGCCGCCTCCGCCGCCGCCGCGGATAACCCATCATCCACCTCTTCATCCTCCTCCAACCCTTTCATTTTCTCCCCCGATCCTCCCCCTAGGCTTCCTCTCACACCCCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAGGGAGAAGCTTCAGATGCCTGATGTCATCAACCAGGAGTTCGCTCGATTGCAGGCCAAGAGAATAACTGTATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACATAAATAAAAATCGTTACACGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGCAAGGATTACAGACCTTCCGCGAGGGGTTATATCAATGCAAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCTACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTATCTCTAGATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGAACCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGCTGAAGAGGCTGTATCATTTACCTCCCGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTGCTGGAGACATGTCTGCTTTAGATCTTGTCAATACCATTGCGACATTTAGGTCCCAGCGAATTGGAATGGTTCAGACACTGGATCAATACTTTTTCTGCTATAGAACTATTGTTGATGAACTAGAAGACCTTCTATCTGTTCCACAGTAG 1191 44.67 MIKQAHSLIQIPNETQFIGFKSIGRVRFCLSILQSSAFQIRPLGNLTSTRSRNHHRRPPMAASAAAADNPSSTSSSSSNPFIFSPDPPPRLPLTPHQIKLCSEALEAFREKLQMPDVINQEFARLQAKRITVSDMKRSCSVALDNVNINKNRYTDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVISRWIKSSNSSLILRHLEVNHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLVNTIATFRSQRIGMVQTLDQYFFCYRTIVDELEDLLSVPQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10132167 10137833 + CrPI670011_09g009860.1 Cre09g0986 507654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0986 396 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 57 388 IPR050348 GO:0004725(PANTHER)
Cre09g0986 396 CDD PTPc_plant_PTP1 179 381 - -
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 370 380 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 196 216 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 321 339 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 283 300 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 178 185 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 PRINTS Protein tyrosine phosphatase signature 354 369 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 MobiDBLite consensus disorder prediction 47 88 - -
Cre09g0986 396 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 303 378 IPR000387 GO:0016311(InterPro)
Cre09g0986 396 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 390 IPR029021 -
Cre09g0986 396 Pfam Protein-tyrosine phosphatase 147 385 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 ProSiteProfiles PTP type protein phosphatase domain profile. 118 387 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 SMART PTPc_3 117 389 IPR000242 GO:0004725(InterPro)|GO:0006470(InterPro)
Cre09g0986 396 MobiDBLite consensus disorder prediction 66 81 - -
Cre09g0986 396 Gene3D Protein tyrosine phosphatase superfamily 94 393 IPR029021 -
Cre09g0986 396 FunFam Tyrosine-protein phosphatase non-receptor type 12 95 394 - -
Cre09g0986 396 ProSitePatterns Tyrosine specific protein phosphatases active site. 324 334 IPR016130 GO:0016311(InterPro)
Cre09g0986 396 SMART ptp_7 284 386 IPR003595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0986 - - - 0.0