Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1019 ATGTGCCATTATTGTGGTGCTGTGACAACAGACTCAGATGGCAAAAAATTGGAAAATGGTAGTTCTGTTAAATTGGATGATGCAGGCCCCGCGTGTTTATGTAAGGTTTGCAAAGAGAATCAGGGGCAAGAAATGATGAACTCAGATAATAGAAGTGATTGTTCAACAGTGGCAAATTTAGATATCAGGGATGGCCAAGAAGGTGCAACAGGAAGTAGCCAAGAAGATATCGATTGTAGGCAAGAAATGATGTCACATAACTTGAGTGAAGTAGTTCATAGCAATGATCAACTCAGTGGAAGAGATGATGAAAGTGTAACGTCAATTAGTCAAGAGGCAACTCACCATGGCTCTGGCGTTCCTGTCAGTGCGGAAATTGAGCAATCCCATTCTAATTGGATGGATACTGATCTGTGGGATCCTCCAGAGCCAGAGGACCCAGAGGATCACATGGAGGGTGGGATGGGTTATAACGACGATGACGATGACGAGTTTGGTGATACCACAGAATGGAGCACCTCAAGTTCCTTTGGTCGCACTGTGGATGACGCCAGTGTTAGCTATAGGTTTAAAGAGGAAAAACAAAGGGCAATGCAACAGGTTATGAATGGGAAGTACAAGGTTTTCATACGCCATCTTCTTAAATTAGTAGGTGTTGCTGCCTCATCGGGGGAGAATAGTGAAAATTGGGTGGATATAGTTTCTTCTTTGTCTTGGGAAGCTGCCACATTTTTAAAGCCTGTAGTAAATGGTAAAGCAACGAATCCAGAAGATCATGTAAAAGTGAAGTGCATTGCAACTGGAACTCCAAACCAAAGTCAATTTATCAAGGGCATGGTATTCAAGAAGCATGCAGCTCACAAACACATGCCAACGCATTGTAAGAACCCGAAGTTAATACTGATTCAAGGCATGCTTGGTGAGGCTCCAATAAGTAGACTGTCTTCATTTAATTCAATGGATCAGGAAAATGATTTTACGAATCATGTTATAGAGATGATTGAAGGTTGCACTGCGAATGTGATTTTAGTTGAAAAAACTGCAGCACGAGTTATCCAAGAAGCAATTCTCAAGAAAGGCATGACATTAGTGCTTGATATGAAGCTCCACCGTCTGGAGAGAATAGCTCTTTGTACCGGTTCACCAATTTTAACATCTGAAACTTTAATGAGCCAAAAGACAAGACAATGTGATGCTGTTTATTTTCAAAAAATTGTAGAAGAACATGCTGGTGTTTTGGAGGGAGGAAAGATGCCAACTAAAACTTTAATGTTTATTGAGGGCTGTCCTACACGTTTGGGTTGTACGATTTTGCTGAAAGGAGCTCACAGTGATGAACTGAAGAGGGTTAAGTTTGTTGTGCAGTGTGCCGTTGTTATGGCATTTCACTTAATATTAGAGACTTCTTTCCTTGTTGACCAGCGAGCTATGTTTGCAACTATTCCATTTGGTGGAGTACCAGCTATTGTTTCATCTGATCCACAAGCACCTTTAGAGCCTTGTAGCCTAAATGTACGTCAAGCTGAAAATTCAAGTGATAAAAGTGAAGAACCGACTGACTCAACGAATGTTTATATTTCAAATGGATCCCATGAGGAGGCATCTAACGGATCAAACCTGGAGTCAGTGGAAAAGCTAATGTCCTCTGAACCAGAACCATATAATCCTGCCATATTTTCTGGATTCTCATCCATTTCTGATTCGTTAAAGAGAGTCATGGGAGAAAGTTTCCTTTTATCCTCTCCCTATCAGTCATTGTCTTCTTATTTTGGACATGGGAGTGACCTGAGTGGCTTGGTTGCCAAGTCTGACTCAGTTTCATCTACTCCACAGGCAGCTGATCAGTTTGATGTGGAAGTTAGGGTTAGTTCTGATGAAGAGAATTCAGTTCATGAACAGTCTATGTCACATCAATCAACCTTGGAAGGCCTTGGATTCCATGAAACTGCTCCTAACTATTCTGAAGACACAATGCAGAAGAAAACGTCATTGGATTCTCAGAGTATTTTGGTTTTGATGTCGAGCCGAAATGCTTTGAAAGGAACCATGTGTGAGCAGAGCCATTTTTCACATATTGTGTTCTACAAGAATTTTGATGTTCCTCTTGGAAAATTTTTACAAGAAAATTTACTAAATCAGAATAATCTCTGCACTGTCTGTGGTGAACTGCCGGAAGCTCACTTTTACTATTACGCACACTATCGAAAGCAGCTTTCCATTCAAGTCAAACAGCTTCCAGTGGATAAAGTTTTGCCAGGTGAAACAGAAGGAAAACTTTGGATGTGGAGTCGTTGCAGTAAATGTAAATCTAAGGGAGGACCTTCAAAGTCCACAAAAAGGGTGCTGATCTCTACAGCCGCACGTGGCTTATCATTTGGGAAGTTTTTGGAACTTTGTTTCTCTGATGACACTTTACCTAGTAAATCATCAGTTTGTGGCCATTCATTGTTTGGGGACTTCCTCTACTTCTTCGGACTGGGCAATATGGTTGCTATGTTCAGATACTCTGAGGTAGCAATTTATACGGTCTCTATGCCTCCTCAGAAACTGGAGTTCAACAGTTCAATGAGACAAGGTCATCTCATCAGAGAAACTGAAAATGTTTACACGAAGGGGATGGTGCTTTTCACTGAGATTGCGCATTCTCTGAAGAAGATCATATCTGAACGTAAAAGTTCAAATGTAAACCACCCTCAAGGCTTTCTCAATGACTTTTCTTTGGTTGAAGAAATGTTAAACGAAGAAAGATCAGAATTTGAGGTAAATATTCAAAATTCTCTTTCTAAGAAAGGAAACCTGGACTTCGCTTTTCACAAATATCTCAATCTGAATCGTTTGCTCTGGGACCTGCTGCTAGAATCATGTATTTGGGATAGACGCCTGCAATCGTTAATGTCATTGGGTGTTACAACAAACTCTGGCACCTCTGAAAATGTTGAGCCAGAATCAGTTATGTTGAAGATGAATAGCAACATTGATGTTGGACCTGAGGGATCGGAATCAATTGTAGAAAATGATGATACAAAAGTTCAGCAAGATATGTCTGTGGATGAAAATGTATTACCTCTGAAAGAAATTGCAGTTGAAGGTTCGGATGGAGAGTCTGGTGGTGATGGACTTAATTTACCTTTGGCGAATGAAGTCACGGAGATACCGATTATGGATGATTTGAGCCCCAAGAAACTTTCTCGCCAAGGGTCTTTGTCAAATGGCTTTGACCGTCACCATTCAGATTATGAGGATCCTCAAGTAGGAAGTGTTCTGTCATCTGGTGATTTGCATGTAGATAGGACCATTCCAATTTCAACAGGTGATTCGACCCTCAGCAAATTGTTCTGGACCCCTTTTTCGGAGATCCGGCAGATGAACATGAGGGACATCCAGAGAAGCTACTTTCCCGAACTCAAGTCCATCAGTAGCTATACTCCAAAACTCTTGCCCGCAGCCTCTGACTTCATCCACGAAGAAGGACAGAAGCTACACATTCGTCTTGCAAATGATAATTTTATTGTTTCAGACTATGAGGGTGAACTCTCGAGCATAGTTGCTTGTGTACTTGCTCTGTTGAAAGATCTACCCTGTCAAACAGATTCTCATAATGAGGATAGTAAGGGAGAGGGTGAAGGTGTTTTACAAGCAGCTTTGAGTTCGCGAAGCCTAAATAAAGTTCCCTCCAATGGATCCTCAGATTCAGACTCGAGCATCTCTTCAGAAGAATATCGGTTCTCAAGTTTTGACAGGTTAAATTTGTTGGATTCTCTTGTTCCAGAGACTTTCAAGCGAGCAGATCATGAAGGGGTCATAAAGTCACTAGCAAAGGGAAAATATCTTGTGAATTGTCCATATTTCAATCAGTTCCGTGATCTTCGAAGTCGGTGCTGCCCATCAGAGCTCCATTACATAGCTTCCTTAAGCCGTTGTATAAACTGGAACGCAAAAGGTGGGAAAAGCAAATCTTTTTTCGCCAAGACACTTGATGACAGGTTCATTATAAAAGAAATTAAAAGGACGGAATATGATTCATTTATGAAGTTCGCTCCTGAGTATTTCAAGTACATTAACGAATCATTTGACATGGGGAACCAGACCTGCCTTGCTAAAGTTCTTGGAATCTATCAGGTAACGGTGAGGGAGTCGAAGAGTGGGAAAGAGATGAGACATGATTTGATGGTTATGGAGAATCTCAGTTTTGGTCGCAACATTATTCGCCAATATGATCTTAAAGGAGCTCTACATGCTCGATTCAATCCAGCTACCAACAATTTTGGTGAAGTCCTCTTAGATCAGAACTTTGTGAATGACATGAACTCATCTCCCCTCTATGTGAGTAATCGAGCAAAGCGTCGGTTGCAACGGGCAATTTGGAATGATACCGCTTTCCTCAATTCGATAAATGTTATGGATTATTCTCTGCTTGTCGGGGTCGATGCCGAGAAGAAGGAACTTGTATGTGGGATAATTGATTACCTTAGACAATACACCTGGGACAAGCAACTAGAGACATGGGTGAAATCGTCCCTCATACCGAAAAATGTACTTCCCACTGTCGTCTCTCCGAAAGAGTACAAGAGGCGATTCAGAAAGTTCATGTCTGCACATTTCTTGAGTGTCCCAGATCATTGGTGCCTGCAGCAGAATCTCCCTGGGCCTTGGGAGCTCTGTGGCACCTCAGATCGTGCTTCTTCTCAGAAAGCGAATGGCGAAGACAATGATCTCTCTTCATAA 4725 41.52 MCHYCGAVTTDSDGKKLENGSSVKLDDAGPACLCKVCKENQGQEMMNSDNRSDCSTVANLDIRDGQEGATGSSQEDIDCRQEMMSHNLSEVVHSNDQLSGRDDESVTSISQEATHHGSGVPVSAEIEQSHSNWMDTDLWDPPEPEDPEDHMEGGMGYNDDDDDEFGDTTEWSTSSSFGRTVDDASVSYRFKEEKQRAMQQVMNGKYKVFIRHLLKLVGVAASSGENSENWVDIVSSLSWEAATFLKPVVNGKATNPEDHVKVKCIATGTPNQSQFIKGMVFKKHAAHKHMPTHCKNPKLILIQGMLGEAPISRLSSFNSMDQENDFTNHVIEMIEGCTANVILVEKTAARVIQEAILKKGMTLVLDMKLHRLERIALCTGSPILTSETLMSQKTRQCDAVYFQKIVEEHAGVLEGGKMPTKTLMFIEGCPTRLGCTILLKGAHSDELKRVKFVVQCAVVMAFHLILETSFLVDQRAMFATIPFGGVPAIVSSDPQAPLEPCSLNVRQAENSSDKSEEPTDSTNVYISNGSHEEASNGSNLESVEKLMSSEPEPYNPAIFSGFSSISDSLKRVMGESFLLSSPYQSLSSYFGHGSDLSGLVAKSDSVSSTPQAADQFDVEVRVSSDEENSVHEQSMSHQSTLEGLGFHETAPNYSEDTMQKKTSLDSQSILVLMSSRNALKGTMCEQSHFSHIVFYKNFDVPLGKFLQENLLNQNNLCTVCGELPEAHFYYYAHYRKQLSIQVKQLPVDKVLPGETEGKLWMWSRCSKCKSKGGPSKSTKRVLISTAARGLSFGKFLELCFSDDTLPSKSSVCGHSLFGDFLYFFGLGNMVAMFRYSEVAIYTVSMPPQKLEFNSSMRQGHLIRETENVYTKGMVLFTEIAHSLKKIISERKSSNVNHPQGFLNDFSLVEEMLNEERSEFEVNIQNSLSKKGNLDFAFHKYLNLNRLLWDLLLESCIWDRRLQSLMSLGVTTNSGTSENVEPESVMLKMNSNIDVGPEGSESIVENDDTKVQQDMSVDENVLPLKEIAVEGSDGESGGDGLNLPLANEVTEIPIMDDLSPKKLSRQGSLSNGFDRHHSDYEDPQVGSVLSSGDLHVDRTIPISTGDSTLSKLFWTPFSEIRQMNMRDIQRSYFPELKSISSYTPKLLPAASDFIHEEGQKLHIRLANDNFIVSDYEGELSSIVACVLALLKDLPCQTDSHNEDSKGEGEGVLQAALSSRSLNKVPSNGSSDSDSSISSEEYRFSSFDRLNLLDSLVPETFKRADHEGVIKSLAKGKYLVNCPYFNQFRDLRSRCCPSELHYIASLSRCINWNAKGGKSKSFFAKTLDDRFIIKEIKRTEYDSFMKFAPEYFKYINESFDMGNQTCLAKVLGIYQVTVRESKSGKEMRHDLMVMENLSFGRNIIRQYDLKGALHARFNPATNNFGEVLLDQNFVNDMNSSPLYVSNRAKRRLQRAIWNDTAFLNSINVMDYSLLVGVDAEKKELVCGIIDYLRQYTWDKQLETWVKSSLIPKNVLPTVVSPKEYKRRFRKFMSAHFLSVPDHWCLQQNLPGPWELCGTSDRASSQKANGEDNDLSS 1574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10432024 10443811 - CrPI670011_09g010190.1 Cre09g1019 507687

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1019 1574 Gene3D GroEL 271 441 IPR027409 -
Cre09g1019 1574 CDD PIPKc_PIKfyve 1282 1534 IPR044769 GO:0000285(InterPro)
Cre09g1019 1574 MobiDBLite consensus disorder prediction 517 540 - -
Cre09g1019 1574 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1396 1535 - -
Cre09g1019 1574 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 271 441 - -
Cre09g1019 1574 SUPERFAMILY GroEL apical domain-like 272 441 IPR027409 -
Cre09g1019 1574 Gene3D - 1396 1535 IPR027483 -
Cre09g1019 1574 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 49 1545 - GO:0000285(PANTHER)|GO:0010008(PANTHER)|GO:0046854(PANTHER)
Cre09g1019 1574 MobiDBLite consensus disorder prediction 92 117 - -
Cre09g1019 1574 Pfam TCP-1/cpn60 chaperonin family 212 467 IPR002423 GO:0005524(InterPro)
Cre09g1019 1574 SUPERFAMILY SAICAR synthase-like 1266 1534 - -
Cre09g1019 1574 MobiDBLite consensus disorder prediction 92 122 - -
Cre09g1019 1574 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1216 1534 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cre09g1019 1574 SMART PIPK_2 1255 1535 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cre09g1019 1574 FunFam Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family 1221 1394 - -
Cre09g1019 1574 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1313 1479 IPR002498 GO:0046488(InterPro)|GO:0052742(InterPro)
Cre09g1019 1574 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1229 1394 IPR027484 -
Cre09g1019 1574 MobiDBLite consensus disorder prediction 506 540 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1019 K00921 - - csv:101202759 2663.64
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0127 Cre-Chr9:1541658 Cre09g1019 Cre-Chr9:10432024 1.20E-218 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1304 Blo01g01752 . . Bda03g00414 Bpe02g00190 Bpe04g00380 Bma04g00391 Bma01g02535 . . . Cma09g01172 . . . Cpe06g00918 . . . . . . . . . . . . . . . . . . Cone20ag0680 . . . . . . Bda11g00850 . . . . . . . Cmo09g01170 . . . Car09g01046 . . Bhi09g01620 . . . . . . Cla09g00997 Cam09g1055 Cec09g1057 Cco09g1071 . . Cre09g1019 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004019 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 0 0 7 3 1 43