Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1021 | ATGAGTTGGTTTCAATGTTGCATGTCAGAGGAGAGAGTTAATAGAAATGCTTTGAAAAAGAGCATTAAGGAATACCATGACACAAAAACTTTAGCCTCATTTGCCAATCTTTCCTTCAAGTCTGGTAACAATAGAGGAAGGTACACAAATAAGGAGTTAAAGAGGTTACGAAAAGGGAACATTTTAGCTCAAACTTTTACATTCCGTGAGCTATGTGTTGCAACAAATAACTTCAACAACGAAAATCTATTGGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGCCCTCATTGAAAGCACAAAACAAGTAACGGCCGTGAAGCGACTTGATCCAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATGTTGAGCCTTCTTCACCATCCCAATCTTGTCAATTTGGTTGGGTATTGTGCTGATGCAAATCAAAGGATTTTGGTTTATGAGTATATGGCTAATGGTTCCTTGGAGGATCATCTTCTTGATACAGCTTCAAATAAGCCACCTCTAGATTGGAACACAAGGATGAAAATCGTCAAAGGAATCGCAAGAGGACTCGAATACTTACACGAAACCGTCAGTCCTCCCGTGATATACCGCGACTTTAAAGCTTCAAACATATTGTTGGATGAAGAATTCAATGCAAAGCTCTCTGATTTTGGTCTTGCAAAGATAGGTCCCATTGGAGATCAATCTCATGTTTCCACAAGAGTGATGGGAACTTATGGTTATTGTGCTCCTGAATATGCACTTACAGGACAATTGTCCACCAAATCCGATGTCTACGGTTTCGGCGTCGTCTTCTTGGAGATAATCACAGGAAGACGAGTTATTGACAACACAAAACCAACTGCACAAAAAAATTTAATTTCTTGGGCACAACCACTTTTCAAAGACAGAAGGAAATTCACACTAATGGCAGATCCAAAGCTAGAAGGAAATTACCCAGTGAAGGCTCTTTATCAAGCTCTAGCAGTGGTAGCCATGTGTTTGCAAGAGGAAGCAAATACTCGGCCATTGATTAGCGACGTGGTTACAGCGCTTCAATATTTAGCTGTGAGTGACAAGAATGTCGATGAAGACGTAGATGACGAATCAGATTCGGAGTCGGTATCTGAATCGGAATTAAGTTGTTCATATTCATGTTCAACTTCTCCTGATAGAAGAAGTGATATTGGAGGTAAAAATGTTGGTGTTGAAGGTGATGGGAGAGGAGAGTGGGCACGAATCACCACCCGTGGATTCCCATTCATTCTACCCAACTCCCATGTTCTTCAGATTCAATTCCCTTTCTTAATCGCCATGAAAAGACGGACTTTGCTCAAGGTCATCGTTCTCGGTGATAGTGGGGTTGGTAAGACGTCGTTGATGAACCAGTATCCTTCTGAATATTGGTTGTTGACAATGATATTGATCTGTGTTTTGAGCATATACGTGCATAAGAAGTTCAGCCAGCAATATAAAGCTACAATTGGTGCAGATTTTGTCACCAAGGAACTTCAAATTGACGATAGGCTTGTCACACTTCAAATATGGGATACAGCCGGACAAGAAAGATTTCAAAGTCTTGGAGTTGCATTCTATAGAGGGGCAGATTGCTGTGTTCTAGTCTATGATGTTAACGTGATGAAGTCATTTGACACACTTGATACTTGGCACGATGAGTTTCTTAGACAGTTCTACAGTAATGGTTTCAGAGGAAGGGAAGGGGCTTTTTGGGTTGTACCCTGCATCCTCATTTTTTCCTTCTCATTCAAAAAGTGTTGTTTTATTTGCGTTGCTCTGGCAAACCCACCTGACCCTAGGACGTTTCCGTTTATTTTGCTTGGAAATAAGATTGACATTGATGGTGGGAATAGTCGAGTGGTCTCTGAGAAGAAAGCTAGGGAATGGTGTGCTTCAAAAGAAAATATTCCCTACTTCGAGACATCAGCTAAAGAGGACTACAACGTCGATGCTGCTTTTTTATGCATTGCCAAGACTGCATTAGCCAATGAACATGAGCAGGATATATATTTCCAAGGAATCCCCGAAACCGTCGTGGAGACTGAGCAAAGAGGTGGCTGCGCATGCTGA | 2088 | 41.28 | MSWFQCCMSEERVNRNALKKSIKEYHDTKTLASFANLSFKSGNNRGRYTNKELKRLRKGNILAQTFTFRELCVATNNFNNENLLGEGGFGRVYKALIESTKQVTAVKRLDPNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCADANQRILVYEYMANGSLEDHLLDTASNKPPLDWNTRMKIVKGIARGLEYLHETVSPPVIYRDFKASNILLDEEFNAKLSDFGLAKIGPIGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYGFGVVFLEIITGRRVIDNTKPTAQKNLISWAQPLFKDRRKFTLMADPKLEGNYPVKALYQALAVVAMCLQEEANTRPLISDVVTALQYLAVSDKNVDEDVDDESDSESVSESELSCSYSCSTSPDRRSDIGGKNVGVEGDGRGEWARITTRGFPFILPNSHVLQIQFPFLIAMKRRTLLKVIVLGDSGVGKTSLMNQYPSEYWLLTMILICVLSIYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDTWHDEFLRQFYSNGFRGREGAFWVVPCILIFSFSFKKCCFICVALANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANEHEQDIYFQGIPETVVETEQRGGCAC | 695 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 10465024 | 10478039 | - | CrPI670011_09g010210.1 | Cre09g1021 | 507689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1021 | 695 | ProSiteProfiles | small GTPase Rab1 family profile. | 440 | 695 | - | - | |
Cre09g1021 | 695 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
Cre09g1021 | 695 | FunFam | Serine/threonine-protein kinase PBS1 | 155 | 371 | - | - | |
Cre09g1021 | 695 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 154 | - | - | |
Cre09g1021 | 695 | ProSiteProfiles | Protein kinase domain profile. | 78 | 355 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1021 | 695 | SMART | ras_sub_4 | 442 | 669 | - | - | |
Cre09g1021 | 695 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 350 | IPR011009 | - | |
Cre09g1021 | 695 | Pfam | Ras family | 604 | 666 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g1021 | 695 | Pfam | Ras family | 477 | 564 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g1021 | 695 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 201 | 213 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g1021 | 695 | ProSiteProfiles | small GTPase Rho family profile. | 437 | 671 | - | - | |
Cre09g1021 | 695 | Gene3D | - | 438 | 679 | IPR027417 | - | |
Cre09g1021 | 695 | CDD | Rab7 | 445 | 672 | - | - | |
Cre09g1021 | 695 | ProSiteProfiles | small GTPase Ras family profile. | 439 | 695 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g1021 | 695 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 439 | 673 | IPR027417 | - | |
Cre09g1021 | 695 | FunFam | probable serine/threonine-protein kinase RLCKVII | 50 | 154 | - | - | |
Cre09g1021 | 695 | SMART | rab_sub_5 | 445 | 669 | - | - | |
Cre09g1021 | 695 | PANTHER | OS07G0668900 PROTEIN | 37 | 374 | - | - | |
Cre09g1021 | 695 | PRINTS | Transforming protein P21 ras signature | 445 | 466 | - | - | |
Cre09g1021 | 695 | PRINTS | Transforming protein P21 ras signature | 504 | 526 | - | - | |
Cre09g1021 | 695 | PRINTS | Transforming protein P21 ras signature | 644 | 666 | - | - | |
Cre09g1021 | 695 | PRINTS | Transforming protein P21 ras signature | 486 | 502 | - | - | |
Cre09g1021 | 695 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 380 | - | - | |
Cre09g1021 | 695 | CDD | STKc_IRAK | 84 | 353 | - | - | |
Cre09g1021 | 695 | ProSitePatterns | Protein kinases ATP-binding region signature. | 84 | 107 | IPR017441 | GO:0005524(InterPro) | |
Cre09g1021 | 695 | MobiDBLite | consensus disorder prediction | 363 | 400 | - | - | |
Cre09g1021 | 695 | SMART | rho_sub_3 | 447 | 669 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cre09g1021 | 695 | Pfam | Protein kinase domain | 79 | 349 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g0439 | Cre-Chr2:1630947 | Cre09g1021 | Cre-Chr9:10465024 | 3.90E-80 | dispersed | |
Cre09g0190 | Cre-Chr9:2093863 | Cre09g1021 | Cre-Chr9:10465024 | 1.90E-80 | dispersed | |
Cre09g1021 | Cre-Chr9:10465024 | Cre10g0763 | Cre-Chr10:7436416 | 4.10E-175 | dispersed | |
Cre11g2175 | Cre-Chr11:33468511 | Cre09g1021 | Cre-Chr9:10465024 | 6.60E-23 | dispersed | |
Cre11g2237 | Cre-Chr11:34151206 | Cre09g1021 | Cre-Chr9:10465024 | 2.90E-66 | dispersed | |
Cre09g1021 | Cre-Chr9:10465024 | Cre05g0718 | Cre-Chr5:6341480 | 2.30E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64404 | PF00069 | Pkinase | 2.80E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1021 | - | - | - | 0.0 |