Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1030 ATGTTTGTGATTTCTTGTTTTGAGTTTACCATGTTGAGGTTGTTGGTTATTGAGTTTAAGGAGCAGCTAGTTTTGGATAAAGCTCTTCGCTTCCTCGTCGATGCTTCGAAGACGATCGCTTTCGCTTTCTTCCTATCTCTTCTCGCTCTAGTTGGTGCGTCGGTGGGAACGGTGATCGGAGCTTTCAAAGGCCATGGTGTGGCCATAGGCGCTATTGCCGGCGCCGCCGTGGTCCTTCAGATATTGAGCTGCACTGCATCTGGGCATAGATATTCTTTATCAAAGGAAGCAATAATGGAGAGGCTGATGGATGGGAAGGGGTTGATGAACTGGGCGAGCAGCTTCTCGGAGTATATGTACCGAGAGATATCGGAGTTCGTCGACGTCGCCGGAGAAAGTTGTGTAGAAGGGATGTCAATGGAGAGAGTTCAAATGTTGCCTATTTGTGAATATGATCATAGCAAGATGAACAACTCCATTTCTTGTACCATTTGCTTAGAGGAATTTGAAGATGGAGAATTTGGTACAATTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTCAATGCTGTTGGGTATGTTATGGACCATGATAAACACAAGGCTACCGAGCTACGACAGGTCATAGCTGCAACGGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTATTGTTCTTGGATTCTTAATTCAGAGAAGTGGGGAGGTGCAATCGAGCTTTCAATACTATCCGAATATTATGGGCGTGAAATAGCAGCATATGATATCCAGACCACACGATGTGACTTGTACGGTCAGGAAAAGAATTATTCAGAAAGGGTTCTGCTAATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCATCTGAGGAAGCTCCAGAGGAATTTGATCAGACCATCTTTTCGGTGAATAGAGACAGGACGATTGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGAGCAACAAAGGAAAAGGAGATTCACCGACACTGCCAACTTCACGCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGCCGCGGAAAATAGTCCAGGCTTGCCAATCATTGTTTCCATTCCCAGTTGCAAAGCCATGGACAGCCAAGAAAGGTAAAATTAGCATTACAGCTTGA 1182 44.84 MFVISCFEFTMLRLLVIEFKEQLVLDKALRFLVDASKTIAFAFFLSLLALVGASVGTVIGAFKGHGVAIGAIAGAAVVLQILSCTASGHRYSLSKEAIMERLMDGKGLMNWASSFSEYMYREISEFVDVAGESCVEGMSMERVQMLPICEYDHSKMNNSISCTICLEEFEDGEFGTILRRVIPSDNSCLFNAVGYVMDHDKHKATELRQVIAATVASDPTRYSEAFLGKPNEEYCSWILNSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYSERVLLIYDGLHYDALVMSPSEEAPEEFDQTIFSVNRDRTIGPIEEQALHFVKEQQRKRRFTDTANFTLRCGVCQIGVIGQAPRKIVQACQSLFPFPVAKPWTAKKGKISITA 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10541568 10550399 - CrPI670011_09g010300.1 Cre09g1030 507698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1030 393 CDD OTU_plant_OTU1_2-like 175 338 - -
Cre09g1030 393 ProSiteProfiles OTU domain profile. 177 299 IPR003323 -
Cre09g1030 393 Gene3D - 166 345 - -
Cre09g1030 393 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 169 364 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
Cre09g1030 393 FunFam ubiquitin thioesterase OTU1 173 345 - -
Cre09g1030 393 Pfam OTU-like cysteine protease 183 279 IPR003323 -
Cre09g1030 393 SUPERFAMILY Cysteine proteinases 179 297 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1030 K13719 - csv:101222942 368.622