Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1031 ATGGTTGAATTAGACTACCAAATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATCCGCGTCCAGCAAAGGAATGGGAAGAAGTGCTTGACTACAGTTCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA 339 43.95 MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10561793 10562131 - CrPI670011_09g010310.1 Cre09g1031 507699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1031 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre09g1031 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Cre09g1031 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre09g1031 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743(InterPro)
Cre09g1031 112 Gene3D - 2 112 - -
Cre09g1031 112 NCBIfam translation initiation factor SUI1 7 112 IPR005874 GO:0003743(InterPro)
Cre09g1031 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743(InterPro)
Cre09g1031 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cre09g1031 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - GO:0003723(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g0516 Cre-Chr2:2236454 Cre09g1031 Cre-Chr9:10561793 3.20E-38 dispersed
Cre09g1031 Cre-Chr9:10561793 Cre10g0749 Cre-Chr10:7294473 1.00E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1031 K03113 - csv:101202908 224.172