Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1063 | ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTACACGATTCGTGAAGTACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA | 702 | 46.58 | MTIDHHSDQTTDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 11002521 | 11005113 | + | CrPI670011_09g010630.1 | Cre09g1063 | 507731 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1063 | 233 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 46 | 230 | IPR020422 | GO:0006470(InterPro) | |
Cre09g1063 | 233 | Pfam | Tyrosine phosphatase family | 42 | 221 | IPR004861 | - | |
Cre09g1063 | 233 | Gene3D | Protein tyrosine phosphatase superfamily | 40 | 220 | IPR029021 | - | |
Cre09g1063 | 233 | PRINTS | Plant and fungal dual specificity phosphatase signature | 41 | 58 | IPR020428 | GO:0016791(InterPro) | |
Cre09g1063 | 233 | PRINTS | Plant and fungal dual specificity phosphatase signature | 78 | 91 | IPR020428 | GO:0016791(InterPro) | |
Cre09g1063 | 233 | PRINTS | Plant and fungal dual specificity phosphatase signature | 97 | 111 | IPR020428 | GO:0016791(InterPro) | |
Cre09g1063 | 233 | PRINTS | Plant and fungal dual specificity phosphatase signature | 144 | 158 | IPR020428 | GO:0016791(InterPro) | |
Cre09g1063 | 233 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 41 | 218 | IPR029021 | - | |
Cre09g1063 | 233 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 166 | 176 | IPR016130 | GO:0016311(InterPro) | |
Cre09g1063 | 233 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cre09g1063 | 233 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 24 | 227 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Cre09g1063 | 233 | CDD | PFA-DSP_Siw14 | 40 | 217 | - | - | |
Cre09g1063 | 233 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1338 | Cre-Chr3:23821375 | Cre09g1063 | Cre-Chr9:11002521 | 2.70E-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1063 | K18045 | - | csv:101209768 | 354.755 |