Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1112 ATGGAGCTATTTCCAGCACAACCAGATTTATCACTCCAAATTAGCCCTCCAAATACCAATAAACCCTCTTCATCTTGGAGAAGAACAAGTAGTTCTTCACAAGAAGAAGTTGATTTGGGGTTTTGGAATAATCTTAGTTTGGAGTCTTCTTCTAAATCCACTCCCAAACATCATCATCCGCATCATCATCATCTTCATCATCTTCATCCTCACTCTTGTTTTGATCTCTCTCTCTCAAATTTAACCCAAATTAACCATCATCAATACCCAAACATTTCTCCTCCTCCTAGTACTCCTAATCATCTTCTTCATCATCATCATCATCATCGTTATCCCGCTCTCGATACCACCGCACACCTTTTCGAAACCCTAAACAAAACCCACCACCGACCCGCCATTTTTCACCAGACGCCATCACTTGACCCGCCACCACCTCCCTCGCTCCCGTTTCCGGGCCAAACCAATGGGCAAGACTTGGGATTTTTGCGACCCATTAGAGGAATTCCAGTGTACCATCAGACGAATAACCCCTCCGGCACCGGAAACGGCGGTGTTGTCACTCCCTCCGCTGCTGGTCACGGCCAGATTATGATGCGATCGAGATTCTTGTCGAGGTTTCCGGCCAAACGCAGCATGAGAGCCCCTCGGATGAGATGGACTTCCACACTTCATGCTCGCTTTGTTCATGCTGTTGAACTTCTTGGTGGCCATGAAAGAGCTACGCCCAAGTCGGTTCTCGAGCTTATGGATGTCAAAGATCTAACTTTAGCTCATGTCAAATCTCATTTACAGATGTACCGTACAGTGAAGACCACAGACAGAGCAGCAGCTTCTTCAGGCCAATCAGATTTATATGAAAATGCTTCATCTGGGGACACAAGCAATATTGAAGATATAATATTTGACATTCAAAAACCAGCCATGGGAAGACAAAATGACAACTCAATTCAACAAACAACAAGGCAAAACCCTCACCAAGATAAGGATTATCATGCCCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGTTTACCAAATGATTCTTCTAGGGACCTTTCTTCATCCCTCGAGAATGATATGGATCCAAAGTGCTCAAACAATGAGAGACTATCAGAAATAAGCTCATCAACCGATCTTTGTGGTGTGACAAATAATCCTCATCAGAAGCCTAATTTAGAATTCACATTAGGAAGGCCAATTTGA 1209 44.0 MELFPAQPDLSLQISPPNTNKPSSSWRRTSSSSQEEVDLGFWNNLSLESSSKSTPKHHHPHHHHLHHLHPHSCFDLSLSNLTQINHHQYPNISPPPSTPNHLLHHHHHHRYPALDTTAHLFETLNKTHHRPAIFHQTPSLDPPPPPSLPFPGQTNGQDLGFLRPIRGIPVYHQTNNPSGTGNGGVVTPSAAGHGQIMMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDLYENASSGDTSNIEDIIFDIQKPAMGRQNDNSIQQTTRQNPHQDKDYHALWSNSSREAWLHGLPNDSSRDLSSSLENDMDPKCSNNERLSEISSSTDLCGVTNNPHQKPNLEFTLGRPI 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11664730 11669477 - CrPI670011_09g011120.1 Cre09g1112 507780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1112 402 FunFam Myb family transcription factor 213 271 - -
Cre09g1112 402 MobiDBLite consensus disorder prediction 11 32 - -
Cre09g1112 402 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 401 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Cre09g1112 402 MobiDBLite consensus disorder prediction 49 68 - -
Cre09g1112 402 Pfam Myb-like DNA-binding domain 216 267 IPR001005 -
Cre09g1112 402 MobiDBLite consensus disorder prediction 1 32 - -
Cre09g1112 402 SUPERFAMILY Homeodomain-like 212 268 IPR009057 -
Cre09g1112 402 MobiDBLite consensus disorder prediction 350 369 - -
Cre09g1112 402 NCBIfam myb-like DNA-binding domain, SHAQKYF class 215 268 IPR006447 GO:0003677(InterPro)
Cre09g1112 402 Gene3D - 214 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2130 Cre-Chr5:33126816 Cre09g1112 Cre-Chr9:11664730 4.00E-30 dispersed
Cre08g1490 Cre-Chr8:27707442 Cre09g1112 Cre-Chr9:11664730 1.90E-32 dispersed
Cre09g1112 Cre-Chr9:11664730 Cre11g0564 Cre-Chr11:2683005 2.60E-17 dispersed
Cre05g1232 Cre-Chr5:12071821 Cre09g1112 Cre-Chr9:11664730 4.60E-45 transposed
Cre09g1669 Cre-Chr9:34406179 Cre09g1112 Cre-Chr9:11664730 7.00E-34 transposed
Cre10g0392 Cre-Chr10:2744250 Cre09g1112 Cre-Chr9:11664730 8.00E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54356 None None None None Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1112 - - - 0.0