Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1131 ATGAAGTCAATGGGGTCGACGGAGAGCGTTGATGACCTTGGATATAGTCAGTTGGGGTCAATAGGGATTGTCAGTGGCTGTGGACACGATCATTTGAGTTACCATTGCCACCAGTCAATGCTCATTCCTACTGCCGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGATTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTTTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCGATTATGCTGAAGAGTCGCCTCTTTGTACGACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTCGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGATTGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGGAAACCATATTATATGATGTGGATTGTTTGGAGTTCTTCTTTTATTGGCTGGACAACGCTTGATGCCATTGATTCTTCCAGAGGCATTATAATACTTTGGTGCACTCTTGATTATACTATCCATGAGGTTATTACGGTGTCAGCAAAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAATGGTTTACAAGGGTGGTCATGCTATGCACGTTAATTTTGTTCGCCGCTTATCAGAAAACATTTGA 1107 43.72 MKSMGSTESVDDLGYSQLGSIGIVSGCGHDHLSYHCHQSMLIPTAVNALKSSRSISWLPIGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASIDYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVPIFDGSAGKWVDAIEEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVRITYGIDFPQVPDIGCQWFSTAPLDNMFYAEQIAPSRTFCIYEEIEQMRNMGLIKGGSIENALVCRKPYYMMWIVWSSSFIGWTTLDAIDSSRGIIILWCTLDYTIHEVITVSAKLGSQGIPVAHIMVYKGGHAMHVNFVRRLSENI 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12081603 12099106 - CrPI670011_09g011310.1 Cre09g1131 507799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1131 368 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Cre09g1131 368 SUPERFAMILY Ribosomal protein S5 domain 2-like 202 293 IPR020568 -
Cre09g1131 368 Gene3D lpxc deacetylase, domain 1 62 187 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Cre09g1131 368 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 64 289 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cre09g1131 368 Gene3D lpxc deacetylase, domain 2 199 368 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Cre09g1131 368 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 41 289 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cre09g1131 368 SUPERFAMILY Ribosomal protein S5 domain 2-like 63 182 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1131 K02535 - csv:101205101 504.597