Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1192 ATGGAGATTTTGAAGATATTGGTGGTTGTAATATTGGGTGTAGTTTTGCATGGAATTGAAACTTTAGGCGATGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATTATTCGACGACAAGTTGAGATAGCTGTGCTCAAGGATCCTCGAATGGCTGCTTCACTCCTTCGCTTGCATTTTCATGATTGTTTTGTTATGGGATGTGATGCATCAGTTCTTCTGGACAGCACTGATGAGATGGTGAGCGAAAAGCAAGCAGCTCCAAATGTAAACTCTCTTCGCGGTTTCAATGTTATCGATGAGATAAAATACATATTGGAAGAAGCTTGTCCTTACACTGTGTCTTGTGCTGATATTTTGACCATTGCCGCCCGTGATGCTGTTGTGCTCAGAGGAGGCCCTGGATGGCCAGTGTTATTGGGAAGGAAAGACTCCTTGGAAGCAAGCTTTGATGGAGCCAACAAATACATTCCTTCTCCCAATTCCTCCCTTGAGACCCTAATTGCCAATTTTCAAGAACAAGGTCTTAATGTTGGAGACTTGGTTGCTCTATCTGGAAGCCACACCATAGGGAAAGCAAGATGCTTGAGCTTTAGGCAAAGAGTATACCAAATGAATCCAGAAGAAGAATATGACAGATACAAGAGATACAACACATACAGAAGAATTTTAAGGTCAATCTGCCCTAAAACAGGGCAGGATCAAAGGGTAGCACCCCTAGATTTTAGGACACCTTCAAGATTTGACAATCACTATTTCCTCAACATTCTTGAAGGTAAAGGGCTTTTGGGGTCTGACAATGTGCTCATAACTCAAGACCATGAAGGTGAAATCACAAGACAAGTTTGGAGTTATGCTTTTGACCAAACCCTTTTCTTTGATTCCTTTGTTAAGTCCATTGTCAAGATGGGCAACATCAATGTCCTCACTTCCCATCAAGGTGAAGTCAGAAGGAATTGTAGGTTTACCAATCATTAG 996 41.37 MEILKILVVVILGVVLHGIETLGDGLLVFDYYKETCPFVEDIIRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSTDEMVSEKQAAPNVNSLRGFNVIDEIKYILEEACPYTVSCADILTIAARDAVVLRGGPGWPVLLGRKDSLEASFDGANKYIPSPNSSLETLIANFQEQGLNVGDLVALSGSHTIGKARCLSFRQRVYQMNPEEEYDRYKRYNTYRRILRSICPKTGQDQRVAPLDFRTPSRFDNHYFLNILEGKGLLGSDNVLITQDHEGEITRQVWSYAFDQTLFFDSFVKSIVKMGNINVLTSHQGEVRRNCRFTNH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14068796 14070756 - CrPI670011_09g011920.1 Cre09g1192 507860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1192 331 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 Gene3D Peroxidase, domain 2 164 310 - -
Cre09g1192 331 FunFam Peroxidase 164 309 - -
Cre09g1192 331 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PANTHER PEROXIDASE 72-RELATED 10 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 Gene3D - 31 330 - -
Cre09g1192 331 FunFam Peroxidase 30 172 - -
Cre09g1192 331 ProSiteProfiles Plant heme peroxidase family profile. 26 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 Pfam Peroxidase 44 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Cre09g1192 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cre09g1192 331 CDD secretory_peroxidase 27 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre09g1192 331 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1192 331 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2501 Cre-Chr5:36431809 Cre09g1192 Cre-Chr9:14068796 2.00E-79 dispersed
Cre06g1205 Cre-Chr6:5909996 Cre09g1192 Cre-Chr9:14068796 3.80E-77 dispersed
Cre09g1192 Cre-Chr9:14068796 Cre11g1063 Cre-Chr11:8063455 1.70E-75 dispersed
Cre09g1192 Cre-Chr9:14068796 Cre07g1238 Cre-Chr7:25883449 1.50E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1192 K00430 - csv:116402797 570.081