Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g1265 | ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCGCTCGTTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGGATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATCAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAGATCTCCGACGAGCGTCAGTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTCACATTTCTTGAGAGCTCCGGCCTCGCTAAATACGGCACCGAGGCCTTTCTCGTCAACTTCACCGCCATCACCACCGTCATTTTTGCACTGTTTGTGCTTTTGTCTGTTATTTCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA | 699 | 47.93 | MALAVKAFPFTVVSHVLAIVALVLVLVWTIHFRGGLAWEAVNKDLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSADLRRASVPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLVNFTAITTVIFALFVLLSVISQPCVQEDNHGDYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 17083777 | 17092421 | + | CrPI670011_09g012650.1 | Cre09g1265 | 507933 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g1265 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cre09g1265 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Cre09g1265 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cre09g1265 | 232 | PANTHER | CYTOCHROME B561-RELATED | 5 | 222 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| Cre09g1265 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cre09g1265 | 232 | Gene3D | - | 2 | 226 | - | - | |
| Cre09g1265 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g2484 | Cre-Chr5:36216828 | Cre09g1265 | Cre-Chr9:17083777 | 3.80E-29 | dispersed | |
| Cre07g1038 | Cre-Chr7:15158155 | Cre09g1265 | Cre-Chr9:17083777 | 7.40E-46 | dispersed | |
| Cre09g1265 | Cre-Chr9:17083777 | Cre09g1856 | Cre-Chr9:37043164 | 3.50E-46 | dispersed | |
| Cre09g1265 | Cre-Chr9:17083777 | Cre11g1018 | Cre-Chr11:7503153 | 1.70E-53 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g1265 | K08360 | - | csv:101209308 | 383.645 |