Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1377 ATGGCTTCCTTCCATGCAGAAGATTCTGAGTCTGGCAGTGTTGATTATACTCAACGAGCTCAGTGGCTCCGAGCAGCAATTCTCGGGGCCAACGATGGGCTCGTCTCCGTTGCATCGCTGATGATGGGCGTTGGAGCCGTGAAGCCCGATGCCAAAGCCATGCTTATTGCTGGATTTGCAGGGCTGGTCGCTGGAGCTTGCAGTATGGCGATCGGAGAGTTTGTCTCGGTTTACACCCAATATGATATAGAGAAAGCTCAACTCAAGAGAGATGGGAAGGAAAAAAATAAGAGCATACAACCAAACGACCAGGCTGAGGAGGAAGAGAAGCTGCCAAATCCATTACAGGCTGCACTCGCATCAGCGATAGCGTTTTCGATTGGAGCAGTCATTCCTTTGCTGGCAGCGGTGTTTATCCGAGACCATAAGGTGAGGCTCGGGGTGGTCGCAGCGGTGGTGAGCGTGACGCTGGCAGTTTTCGGGGTAGTTGGAGCCATTTTGGGGAGGACTCCGGTGGGGAAATCGGCGGCAAGAGTGGTTGTTGGAGGGTGGATGGCTATGGCAATTACTTTTGGCCTTACAAAGCTGCTTGGGTCTAAGGGACTGTGA 609 52.87 MASFHAEDSESGSVDYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRDGKEKNKSIQPNDQAEEEEKLPNPLQAALASAIAFSIGAVIPLLAAVFIRDHKVRLGVVAAVVSVTLAVFGVVGAILGRTPVGKSAARVVVGGWMAMAITFGLTKLLGSKGL 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22574325 22575526 + CrPI670011_09g013770.1 Cre09g1377 508045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1377 202 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 198 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Cre09g1377 202 CDD Nodulin-21 21 171 - -
Cre09g1377 202 Pfam VIT family 108 194 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cre09g1377 202 Pfam VIT family 23 102 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0924 Cre-Chr9:9326938 Cre09g1377 Cre-Chr9:22574325 6.10E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1377 K22736 - csv:101214875 336.65