Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1453 | ATGGACAACATTACTGCCCAATTAAAGAGGGGAATCTCCCGCCAATTCTCCACCGGCTCCTTACGCCGAACCCTAAGTCGTCAGTTCACCCGCCAATCCTCTCTTGACCCTAGGAGGAACAATTTGAGATTCAGCTTTGGCCGACAATCTTCTTTGGACCCTATTCGCCGCTGTCCTGATGATGATAATGAGCTTTCCGTTCCTGAGAATTTGGATTCCACTATGCAGCTTCTCTTTATGGCCTGCCGTGGCGATGTTAGAGGCGTTGAGGATTTGCTTAATGATGGTACTGATGTTAATAGTATTGATTTGGATGGCCGCACTGCTTTGCATATTGCTGCCTGTGAAGGTCATGCTGAGGTTGTTAAGCTTTTGCTTAGCCGTAGGGCTAATATTGACGCTCGTGATCGTTGGGGGAGTACGGCAGCTGCAGATGCTAAATATTACGGAAATACAGAAATTTACAACATTCTGAAGGCACGTGGAGCAAAAGTTCCGAAATTTAGGAAGACACCAATGACTGTTGCAAATCCTAGGGAAGTTCCTGAGTATGAGCTTAATCCATTGGAGCTTCAGATTCGAAGGAGTGATGGTATATCAAAGGGGACGTATCAAGTTGCCAAATGGAATGGTACAAAAGTCGCTGTGAAAATTCTTGATAAAGATTGTTATTGTAACCCGGATTCTATAAATGCATTCAAACATGAGTTGACATTATTGGAAAAGGTCCGACATCCCAATGTAGTTCAGTTTGTTGGTGCCGTTACCCAGAATTTGCCAATGATGATTGTTTCCGAATACCATCCTAAGGGTGATTTAGGTTGCTATCTTCAAAAGAAAGGTCGTTTATCTCCATCTAAAGCCTTAAGATTCGCCCTTGATATCGCTAGGGGAATGAACTATCTTCACGAATGCAAACCGGATCCGATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAATGGAGGACAACTTAAAGTTGCCGGATTCGGCTTGATAAGATTGTCAAAAATGTCACCTGACAAAGCAAAACTAGCTCAGCCAGTGGTTATTGATTATTCGAACTCGTACTTAGCACCTGAGATTTACCACGATGAAATATTTGACAGAAGCGTCGATGCATTTTCATTCGGTCTCATTTTATACGAGATGGTTGAGGGTATTCAACCATTTCATCCCAAGCCTCCAGAAGAGGTTGCCAAAGCTATTTGTGCAGAAGGAAAGAGACCTCCATTTAAGATCAAATCGAAAAGTTATCCACCTGATCTAAAAGAATTGATTGAGGAATGCTGGGATCCAGAACCTGTAATGAGGCCTACTTTCTCTGAAATTATTGTAAGGTTGGATAAAATAGTTGCCAACTGCTCAAAACAAGGGTGGTGGAAAGACACATTTAAACTTCCCTGGAAATAA | 1422 | 42.12 | MDNITAQLKRGISRQFSTGSLRRTLSRQFTRQSSLDPRRNNLRFSFGRQSSLDPIRRCPDDDNELSVPENLDSTMQLLFMACRGDVRGVEDLLNDGTDVNSIDLDGRTALHIAACEGHAEVVKLLLSRRANIDARDRWGSTAAADAKYYGNTEIYNILKARGAKVPKFRKTPMTVANPREVPEYELNPLELQIRRSDGISKGTYQVAKWNGTKVAVKILDKDCYCNPDSINAFKHELTLLEKVRHPNVVQFVGAVTQNLPMMIVSEYHPKGDLGCYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPIIHCDLKPKNILLDNGGQLKVAGFGLIRLSKMSPDKAKLAQPVVIDYSNSYLAPEIYHDEIFDRSVDAFSFGLILYEMVEGIQPFHPKPPEEVAKAICAEGKRPPFKIKSKSYPPDLKELIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPWK | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 27746350 | 27750476 | - | CrPI670011_09g014530.1 | Cre09g1453 | 508121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1453 | 473 | PIRSF | ILK | 8 | 472 | - | - | |
Cre09g1453 | 473 | FunFam | serine/threonine-protein kinase STY46-like | 186 | 269 | - | - | |
Cre09g1453 | 473 | SMART | serkin_6 | 193 | 455 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1453 | 473 | Gene3D | Phosphorylase Kinase; domain 1 | 187 | 268 | - | - | |
Cre09g1453 | 473 | Gene3D | Transferase(Phosphotransferase) domain 1 | 269 | 467 | - | - | |
Cre09g1453 | 473 | SUPERFAMILY | Protein kinase-like (PK-like) | 202 | 451 | IPR011009 | - | |
Cre09g1453 | 473 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 75 | 452 | IPR051681 | GO:0004674(PANTHER) | |
Cre09g1453 | 473 | SUPERFAMILY | Ankyrin repeat | 73 | 176 | IPR036770 | - | |
Cre09g1453 | 473 | ProSiteProfiles | Ankyrin repeat region circular profile. | 105 | 137 | - | - | |
Cre09g1453 | 473 | ProSiteProfiles | Ankyrin repeat profile. | 105 | 137 | IPR002110 | GO:0005515(InterPro) | |
Cre09g1453 | 473 | Pfam | Protein tyrosine and serine/threonine kinase | 199 | 451 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g1453 | 473 | CDD | STKc_MAP3K-like | 199 | 451 | - | - | |
Cre09g1453 | 473 | ProSiteProfiles | Protein kinase domain profile. | 189 | 455 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1453 | 473 | SMART | ANK_2a | 73 | 101 | IPR002110 | GO:0005515(InterPro) | |
Cre09g1453 | 473 | SMART | ANK_2a | 105 | 134 | IPR002110 | GO:0005515(InterPro) | |
Cre09g1453 | 473 | SMART | ANK_2a | 138 | 167 | IPR002110 | GO:0005515(InterPro) | |
Cre09g1453 | 473 | Gene3D | - | 48 | 184 | IPR036770 | - | |
Cre09g1453 | 473 | FunFam | Os01g0748600 protein | 179 | 470 | - | - | |
Cre09g1453 | 473 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 310 | 322 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g1453 | 473 | Pfam | Ankyrin repeats (3 copies) | 78 | 165 | IPR002110 | GO:0005515(InterPro) | |
Cre09g1453 | 473 | FunFam | Integrin-linked protein kinase 1 | 47 | 184 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g2018 | Cre-Chr4:37481255 | Cre09g1453 | Cre-Chr9:27746350 | 3.40E-81 | dispersed | |
Cre05g2570 | Cre-Chr5:36921576 | Cre09g1453 | Cre-Chr9:27746350 | 9.20E-59 | dispersed | |
Cre09g1453 | Cre-Chr9:27746350 | Cre11g1883 | Cre-Chr11:30496870 | 2.60E-40 | dispersed | |
Cre09g1453 | Cre-Chr9:27746350 | Cre03g0991 | Cre-Chr3:8722559 | 1.80E-86 | transposed | |
Cre09g1453 | Cre-Chr9:27746350 | Cre02g2139 | Cre-Chr2:34964650 | 1.80E-86 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64409 | PF07714 | PK_Tyr_Ser-Thr | 4.30E-51 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1453 | - | - | - | 0.0 |