Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1509 ATGAAAAAACAGTGGTTGTCTCTCTTTCTCTACAAATCCCCTCAGCCGCTGACCATTGCGACGCCGCCGCCTTCACCGTCATTCATGAGCCACAGTCCGACATCGTGCGTAGGGACACAGTCACTGATTGTCGCCACCTCTATTTGCTTGACCGTCTGCTCATCGTTTCTGGTCGTCGCAGCTATTTTGTCATTTTTGGACCAACCTCTTTATCTCCGTCACGCACCCGGGCGTCATTTTGGTCGTCGTTTCCATCCACCACCGGAAGCCACCATTTGCTCGCTAGAAAGTTGGTTGGGTCAGTTTATAAGGGATTTTAAGCGTTATGGACCTTCGACCTTCGACGGCTGGTCAGAGAAAGCTACCGCAACTGAGCAATGGATTGCAGAGCTGGAGTCATTGTTTGAATACCTAAATTGCGAGGACGATTTTAAGGCGACACACTCACGTTGGGAGGTTGGCGCCTCATCTGGATTTAAAAGAAAGTCTCCCCCGGCTCCGTCAGATCAAACTTCCAAGGCCCATCGTCTGGCCTCGGGGCAAGCTACCACCCTCCCATTGTGGGGCTCGTGCAACAAGCGTCACTCGGGGCAGTGCTGGCTAGGCCAGAGCATTTGCTTCAAGTGTGGAAAGGAAGGTCACTTTGTAAGGATGTGCCAAAATAAAAGGGAGGCCAGCGCAGACAAGCCGACTCCGAAGGCCCTACCAGAAGCTACTCAAGGAGGGAAACAAAAGGCACGCGTCTTTGCACTGAAGAAGGAGGAGGCTGAGGATACGAACGCAATGGTTACAGCGCCTTATTATCAAATGATCTGTGGAGAGATGAGAAGCAATGAAATGGGGAGAGCAACGTTGATGTTTTCAGCGTTTTCTCCTTTCCTGCGCTTAATTTTGGCTATGGCTTTCGTTTTACGGGTGTCTGCAAATGGGGAAGGTGATGCCCTAAATGCCTTCAAGTTGAGTTTGGTTGACCCCAACAATGTCTTGCAAAGTTGGAATACCATTCTTATGAATCCTTGCACATGGTTTCATGTTACATGTGATGAAAAAGAAAGTGTTATACGTGTTGATCTTGGTAATGCCAATCTGTCTGGAAAACTGGTTCCACAGCTTGATCAACTCACAAACTTGCGGTACTTGGAACTCTACAGCAATAATATCAGCGGAACAATTCCAGAAAGATTTGGAAATTTGAAAAACTTGGAGAGCTTGGATCTTTATTCTAACAGTTTAACTGGTCCCATACCTGACACACTGGGCAAACTTACAAAACTAAGTACCTTGCGTCTGAACAACAATAGCTTATCAGGAACCATTCCAATGTCTTTAACCACTGTTCCACTTCAACTTCTGGATCTTTCAAATAACCTTCTAACAGGAGACATTCCTGTCAATGGTTCGTTCTCGCTTTTCACACCAATCAGTTTTGCCAATAATCCTCTTCACATTTCTCCCTCTGCTCCTCCTCCGCCAACGAGAGATATACCACGAACATCTTCAGGTGATGGGGCTAATGGAGTCATTGTTGGAGCAATTGTTGCTGCTGCTGCTTTGCTGGTTGTTGTGCCTGCTACTGCACTTAATCTTTGGCAACGAAAAACTCAACAGGACCACTTCTTTGATGTAGCTGCTGAAGAAGATCCTGAAATTAACCTGGGCCAGCTCAAAAAATATTCTCTGCGCGAGCTGCAAGTTGCCACTGATTATTTTAGCCAACAGAACATTTTGGGCAAAGGTGGATTTGGCAAGGTCTATAAAGGTCGTTTGGCTGATGGTTCTCTTGTGGCTGTAAAACGATTGAAGGAGCAGCCTGCTGAGGTTGGAGAGCTTCAATTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTCCATCGTAATCTACTCCGTCTAAATGGATTTTGCATATCACCAACTGAACGATTGCTTGTCTATCCTTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAGCAATGCCAGCCACCACTCAACTGGGAAATACGTAAACGAGTTGCTATAGGGGCTGCACAGGGACTTGAATATTTACATAATCATTGTGATCCTAAAATTATTCACCGTGATGTGAAAGCTGCAAATATATTACTAGATGATGAATTTGAGGCTGTTGTTGGAGATTTTGGATTGGCTAAACTCATGAACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGGCATATAGCGCCAGAGTACCTCTCGTCTGGAAAGTCTTCTGAAAAATCTGATGTTTTTGGTTATGGAGTAATGCTTCTTGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTAGCAAAAGATGATGACATCATGTTGCTTGATTGGATTTTTCTCAGTTCAATTAAAGAAATGGATGATATGTGTGATAAGCCTTCCTGGCAATATTCTATTGAAGTAACAAACTACCCAAAAGCTCTGCTGAGAGGCCCCAAACGATCCTTCCCAGAATGTAGTGTCAATGAGATTGTAGTATCTCTCATTCTTGAAGAGTTGTTTTGCAATTTCTCCAACGAGCTTACTTTCAATTGGTCCTCTTGTAATTCCTCAGTATCTCTGCTAGAGAGTATTACTGTTATTCAGTACAATGTAAAAGGACTTCTGAATGATAAGAAACTGGAAACGTTGGTCGATCCCAATCTCGGAGGCAATTACGTAGAGGAAGAACTGGAGCAGGTAATTCAAGTTGCACTGCTTTGCACGCAAAGCTCCCCTGTGGAGCGACCAAAGATGTCGGAGGTGTTGCAAATGCTGGAAGGAGATGGTTTGGCTGAAAGATGGGAAGAATGGCAGAAAGAAGAGAGCTCACGCCGAAACTTCAATAATATGGTTCATTCTTCCCACCACCGGAGTAGAACTCCCCAGTTTATTGATTCCACTTCTCATATTGCTCCTGATGTGTTGTCTGGTCCAAGATAG 2958 44.79 MKKQWLSLFLYKSPQPLTIATPPPSPSFMSHSPTSCVGTQSLIVATSICLTVCSSFLVVAAILSFLDQPLYLRHAPGRHFGRRFHPPPEATICSLESWLGQFIRDFKRYGPSTFDGWSEKATATEQWIAELESLFEYLNCEDDFKATHSRWEVGASSGFKRKSPPAPSDQTSKAHRLASGQATTLPLWGSCNKRHSGQCWLGQSICFKCGKEGHFVRMCQNKREASADKPTPKALPEATQGGKQKARVFALKKEEAEDTNAMVTAPYYQMICGEMRSNEMGRATLMFSAFSPFLRLILAMAFVLRVSANGEGDALNAFKLSLVDPNNVLQSWNTILMNPCTWFHVTCDEKESVIRVDLGNANLSGKLVPQLDQLTNLRYLELYSNNISGTIPERFGNLKNLESLDLYSNSLTGPIPDTLGKLTKLSTLRLNNNSLSGTIPMSLTTVPLQLLDLSNNLLTGDIPVNGSFSLFTPISFANNPLHISPSAPPPPTRDIPRTSSGDGANGVIVGAIVAAAALLVVVPATALNLWQRKTQQDHFFDVAAEEDPEINLGQLKKYSLRELQVATDYFSQQNILGKGGFGKVYKGRLADGSLVAVKRLKEQPAEVGELQFQTEVEMISMAVHRNLLRLNGFCISPTERLLVYPYMANGSLASCLRERKQCQPPLNWEIRKRVAIGAAQGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSSGKSSEKSDVFGYGVMLLELVTGQKAFDLARLAKDDDIMLLDWIFLSSIKEMDDMCDKPSWQYSIEVTNYPKALLRGPKRSFPECSVNEIVVSLILEELFCNFSNELTFNWSSCNSSVSLLESITVIQYNVKGLLNDKKLETLVDPNLGGNYVEEELEQVIQVALLCTQSSPVERPKMSEVLQMLEGDGLAERWEEWQKEESSRRNFNNMVHSSHHRSRTPQFIDSTSHIAPDVLSGPR 985
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 30392926 30426900 - CrPI670011_09g015090.1 Cre09g1509 508177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1509 985 SMART c2hcfinal6 205 221 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cre09g1509 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g1509 985 Gene3D Phosphorylase Kinase; domain 1 539 646 - -
Cre09g1509 985 Gene3D - 202 248 - -
Cre09g1509 985 Pfam Protein kinase domain 571 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g1509 985 MobiDBLite consensus disorder prediction 953 975 - -
Cre09g1509 985 SMART serkin_6 570 931 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g1509 985 MobiDBLite consensus disorder prediction 951 985 - -
Cre09g1509 985 SUPERFAMILY Protein kinase-like (PK-like) 551 932 IPR011009 -
Cre09g1509 985 ProSiteProfiles Protein kinase domain profile. 570 944 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g1509 985 Pfam Leucine rich repeat N-terminal domain 309 348 IPR013210 -
Cre09g1509 985 MobiDBLite consensus disorder prediction 156 177 - -
Cre09g1509 985 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524(InterPro)
Cre09g1509 985 SUPERFAMILY L domain-like 310 482 - -
Cre09g1509 985 FunFam Somatic embryogenesis receptor kinase 1 307 492 - -
Cre09g1509 985 Gene3D Transferase(Phosphotransferase) domain 1 647 951 - -
Cre09g1509 985 ProSiteProfiles Zinc finger CCHC-type profile. 206 221 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cre09g1509 985 FunFam Somatic embryogenesis receptor kinase 1 539 646 - -
Cre09g1509 985 Pfam Zinc knuckle 205 220 IPR001878 GO:0003676(InterPro)|GO:0008270(InterPro)
Cre09g1509 985 Pfam Leucine rich repeat 375 435 IPR001611 GO:0005515(InterPro)
Cre09g1509 985 FunFam Protein NSP-INTERACTING KINASE 1 647 794 - -
Cre09g1509 985 Gene3D Ribonuclease Inhibitor 308 487 IPR032675 -
Cre09g1509 985 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 869 956 - -
Cre09g1509 985 MobiDBLite consensus disorder prediction 163 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1178 Cre-Chr7:24513007 Cre09g1509 Cre-Chr9:30392926 3.20E-19 dispersed
Cre09g1509 Cre-Chr9:30392926 Cre10g1082 Cre-Chr10:21439598 8.00E-201 dispersed
Cre11g1240 Cre-Chr11:10737331 Cre09g1509 Cre-Chr9:30392926 1.80E-46 dispersed
Cre09g1509 Cre-Chr9:30392926 Cre07g2068 Cre-Chr7:36241445 4.40E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64410 PF00069 Pkinase 1.40E-43 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1509 K13416 - csv:101216386 843.573