Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1526 ATGAGCGGACGAATCGTGAGCGACGAAGGAATGGAACAGGCAGAGCAGAGAAACGAAGCGTTGAACATTGCATCACCCTCAAAGGTGGGTGTGCCGCCGAGGAAGAACGTGTGGGAAGAGTTTAATTCTGTGGTGAAAGAGACGTTTTTCTCTGATCAGCCTCTTCGTCATTTCAAAGACCAACCTAAGCATAAGAAGGTTGCTCTCTTTGTCCAAGGTCTCTTCCCCATATTCCAATGGGGAAGGGGATATAACTTTAGTAAGTTCAAAGGGGATCTCATTGCTGGCTTAACCATTGCTAGTCTCTGCATTCCTCAAGACATTGGATATGCCAAGCTCGCTAATTTACCTCCTGAAAATGGACTTTATAGTAGTTTTGTCCCGCCGTTGGTATACGCGGTGATGGGGAGCTCTAGGGATATTGCAATCGGCCCCGTTGCTGTGGTGTCGCTTTTGCTGGGGACCCTGCTAGGGCAGGTGTACGACCCGGTGAAAGAGGTGGAGCAATACAGACGGCTGGCTTACACGGCGACTTTCTTCGCCGGAGTAACTCAGTTGGCTCTAGGGTTCCTCCGGCTCGGATTCTTGATTGACTTTCTGTCGCACGCCGCGGTTGTCGGGTTCATGGGAGGTGCGGCCGTCACCATCGCCCTTCAGCAGCTGAAAGGTCTTCTTGGCATAGTAAACTTCACCAAGAAAACTGATATCATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGCACCATGGGTGGAACTGGGAGACTATACTCATAGGCGTTTCATTTCTGGCCTTTCTTTTGGCTGCAAAATACATTGGCAAGAAATACAAGAAACTGTTCTGGATTCCAGCCATTGCCCCCTTAACATCTGTTATACTTTCCACATTTTTTGTGTACATTACTCGAGCAGATAAACATGGAGTTCAGATTGTAAGACACTTAGATAAAGGAATAAATCCACCATCCCTTGATAAGATATTCTTCCATGGAGACGATCTCACCCAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTGATTGGCCTAACGGAAGCAGTGGCAATTGCAAGAACATTTGCAGACCTAAAAGACTATGAGATTGACGGTAACAAAGAAATGATGGCTCTTGGAACCATGAACATTGCTGGCTCCATGACTTCTTGCTATGTAGCCACAGGATCGTTCTCTCGGTCGGCGGTGAACTACATGGCCGGCTGCAACACACCGATGTCAAACATCGTCATGGCATGCGTCGTTCTCTTGACATTAGAGCTCATCACACCCCTTTTCAAGTACACCCCTAATGCCATTCTCGCCTCCATCATTATCTGCGCCGTCATCGGTCTCATCGACATCGATGCCGTGATTTTGCTTTGGAAGATCGACAAATTCGACTTCATTGCCTGCATGGGGGCTTTCTTCGGTGTCATCTTTGATTCCGTTGAGATTGGTCTTCTCATTGCTGTTAGTTTGTCATTGTCCAAAATTCTATTGCAAGTAACAAGACCGAGAATTGCGTTGCTTGGGAAGCTCCCAAAGATTCCTATTTTTAGAAACATTTTGCAGTACCCTGGGGCAACGAAGATTGCAGGAGTTCTAATGGTTAGGGTTGATTCTTCAATATACTTCTCCAATGCCAATTATGTCAAAGAAAGGATACTGAGATGGCTGGCAGATGAAACAGAGAAGCTCGAAGACCAATCTTTGCCAATCAAAGTCGTGGTCGTCGACATGTCTCCCGTATCCGATATCGACACGAGTGGCATCCATGCCTTGGAGGGTTTGCACTCTCATTTGCATAAGAAGGAAATTGCCCTTGCACTTGCAAATCCAGGCCCAGTGATCATGGAGAAGCTCTTAGCTTCAAACTTTGATAAGCTCATTGGAGAAGACAACATTTTCCTCAGTGTTAACGAAGCTATTAAGATTTATGCCCCAGATGCTGTTCTTGATCCTTAA 1956 46.37 MSGRIVSDEGMEQAEQRNEALNIASPSKVGVPPRKNVWEEFNSVVKETFFSDQPLRHFKDQPKHKKVALFVQGLFPIFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPPENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLGQVYDPVKEVEQYRRLAYTATFFAGVTQLALGFLRLGFLIDFLSHAAVVGFMGGAAVTIALQQLKGLLGIVNFTKKTDIISVMRSVWSNVHHGWNWETILIGVSFLAFLLAAKYIGKKYKKLFWIPAIAPLTSVILSTFFVYITRADKHGVQIVRHLDKGINPPSLDKIFFHGDDLTQGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNYMAGCNTPMSNIVMACVVLLTLELITPLFKYTPNAILASIIICAVIGLIDIDAVILLWKIDKFDFIACMGAFFGVIFDSVEIGLLIAVSLSLSKILLQVTRPRIALLGKLPKIPIFRNILQYPGATKIAGVLMVRVDSSIYFSNANYVKERILRWLADETEKLEDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHSHLHKKEIALALANPGPVIMEKLLASNFDKLIGEDNIFLSVNEAIKIYAPDAVLDP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 30768953 30775860 + CrPI670011_09g015260.1 Cre09g1526 508194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1526 651 NCBIfam sulfate permease 76 639 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cre09g1526 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Cre09g1526 651 FunFam Sulfate transporter 31 501 645 - -
Cre09g1526 651 Pfam STAS domain 523 639 IPR002645 -
Cre09g1526 651 Gene3D STAS domain 516 646 IPR036513 -
Cre09g1526 651 PANTHER SULFATE TRANSPORTER 62 641 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cre09g1526 651 Pfam Sulfate permease family 89 470 IPR011547 GO:0016020(InterPro)
Cre09g1526 651 SUPERFAMILY SpoIIaa-like 526 642 IPR036513 -
Cre09g1526 651 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1187 Cre-Chr3:12698964 Cre09g1526 Cre-Chr9:30768953 3.70E-165 dispersed
Cre09g1526 Cre-Chr9:30768953 Cre11g0620 Cre-Chr11:3312001 6.70E-172 dispersed
Cre09g1526 Cre-Chr9:30768953 Cre11g1949 Cre-Chr11:31287786 4.70E-250 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1526 K17470 - csv:101202746 1179.85