Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1536 ATGACAAAGCTTCGTTTTAATCCAATTCTCGTCTTGGTTGTGTCTATCGCGGTGCTATTCACCTTTTGTAGCACCCTCGTGCATGGCCAAGCTACACGCATTGGCTTCTACTCCAACTCTTGCCCTCAAGTTGAGTCCATTGTTGCATCAACAGTCCGATCTCATTTTCAATCTGACCCTAGAATTGCTCCAGGTTTGTTAAGAATGCACTTCCATGACTGTTTCGTTCGGGGTTGTGATGCTTCTGTGCTTCTTGCTGGCTCCAATAGCGAGAGGACTGCGCCGCCCAACCTTTCGTTAAATGGGTTTGAAGTGATTGATGATGCTAAGTCTCAGCTCGAAGCTGCTTGTCCTGGCGTTGTATCTTGTGCTGACATTCTTGCTCTTGCCGCCCGTGACTCTGTAGTTTTGACAAGTGGACTACGTTGGTCAGTGCCCACAGGACGAAGAGATGGCACAATTTCTTTGGCTTCTGAAGCTAACAACTTGCCTGGATTTACAGATTCAATTGACGTTCAAAAGCAAAAATTTAGCGACAAAGGTCTCAACACTCAAGATCTTGTCACTCTTGTGGGTGGACACACAATTGGCACAACACAATGCCAATTTTTCAACTACAGACTCTTCAACTTCACAAACAATGGACCAGATCCAAGCATGGACCCAGCGTTCGTGACTCAGATGCAAGCGCTGTGCCCTCAGAACGGCGACGGTAGCCGCAGGGTTGCATTGGACACAGGCAGCGCCGGGCGGTTCGACACCATGTTCTTCTCAAACTTGAGGAACGGACGTGGGGTTTTGGAGTCTGATCAAAAGCTATGGACCGACGCTTCCACTCGCACTTTTGTCCAACGCTTTCTGGGTTTGAGAGGCGTCTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTTAAGATGAGTAACATTGAAGTTAAGACTGGAACTCAAGGAGAAATTCGGAAAGTTTGTTCTGCAGTTAACTAA 990 47.17 MTKLRFNPILVLVVSIAVLFTFCSTLVHGQATRIGFYSNSCPQVESIVASTVRSHFQSDPRIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTAPPNLSLNGFEVIDDAKSQLEAACPGVVSCADILALAARDSVVLTSGLRWSVPTGRRDGTISLASEANNLPGFTDSIDVQKQKFSDKGLNTQDLVTLVGGHTIGTTQCQFFNYRLFNFTNNGPDPSMDPAFVTQMQALCPQNGDGSRRVALDTGSAGRFDTMFFSNLRNGRGVLESDQKLWTDASTRTFVQRFLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGTQGEIRKVCSAVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31092975 31094995 + CrPI670011_09g015360.1 Cre09g1536 508204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1536 329 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 CDD secretory_peroxidase 33 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre09g1536 329 Gene3D Peroxidase, domain 2 164 308 - -
Cre09g1536 329 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cre09g1536 329 PANTHER PEROXIDASE 25-RELATED 21 325 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cre09g1536 329 Pfam Peroxidase 48 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 FunFam Peroxidase 164 308 - -
Cre09g1536 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1536 329 Gene3D - 36 329 - -
Cre09g1536 329 FunFam Peroxidase 35 177 - -
Cre09g1536 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cre09g1536 329 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g1086 Cre-Chr1:19475845 Cre09g1536 Cre-Chr9:31092975 2.80E-70 dispersed
Cre06g1975 Cre-Chr6:27112757 Cre09g1536 Cre-Chr9:31092975 4.50E-108 dispersed
Cre06g1977 Cre-Chr6:27127219 Cre09g1536 Cre-Chr9:31092975 1.50E-105 dispersed
Cre09g0455 Cre-Chr9:4347945 Cre09g1536 Cre-Chr9:31092975 1.70E-62 dispersed
Cre09g1493 Cre-Chr9:29686902 Cre09g1536 Cre-Chr9:31092975 2.40E-77 dispersed
Cre09g1536 Cre-Chr9:31092975 Cre11g1063 Cre-Chr11:8063455 1.20E-63 dispersed
Cre09g1536 Cre-Chr9:31092975 Cre09g1538 Cre-Chr9:31132415 1.10E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1536 K00430 - csv:101217567 571.622