Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1538 ATGGCGAAAGTTGGTTTCATTTTAGTTGTATATGTGGAGGTGTTGCTTAGCTTGGCCGCCACCACCGTGCATGGCCAAGGCACACGCTTCGATTTTTATCGCGACACGTGCCCTAAAGTCGAATTCATCGTTCGATCCACCGTTCGATCCCATTTTCGATTGGATCCCTCAATTGCTCCTGGGTTATTGAGAATGCACTCACATGACTGCTTTGTTCGAGGATGTGATGCTTCTGTACTTCTTTCCGGTCCCAATTCTGAAAGGACGGCTGTGCCTAACCGTACTTTGAAAGGGTTTGAGGTTATTGACGATGCCAAGTCACAACTTGAGGATGTCTGCCCGGGTGTCGTGTCGTGCGCTGATATTCTTGCTCTTGCTGCTCGTGACTCGGTGGTTCTGACGGGTGGATTAGGTTGGGAAGTTCCGACGGGACGAAGAGATGGTAGAGTTTCATTGGTTTCAGAGGTGAAGTTGCCTGGTTTTTCAGATTCCATTGAAGTTCAGAAGGAGAAGTTTAGGTCTATGGGTCTCAACACACATGACCTCGTCACTCTCGCAGGTGCCCATACCATCGGTACGGCGTCATGTCGTTTTTTCAGTTACAGACTCTACAACTTCACCACGGTGACTGAAAGCGGCGCTGATCCGACCCTTAACCCGTCGCTTGTCGGTCGGCTACGAGAACTTTGCCCTGAAGACGGAGATGGCTCAAACAGAGTCAAACTCGACATGGATAGTCCCGAACAATTCGACTTGTCGTTCTATAAAAACTTGAGACATGGAGGAGGGATCTTGGAGTCTGATCAAATGCTGTGGAATGATGACTCCACTCGCCCTATCGTCCGACATTACTTGGGTATGAGAATTTTAAGAGGGCGTTCTAGCTTTAGAGTTGAGTTTGGAAGATCCATGGTTAAAATGAGCAATGCACAAGTTAAAACTGGCACTGTTGGTGAAATTCGAAGGGTTTGCTCTGAGGTTAATTGA 987 47.92 MAKVGFILVVYVEVLLSLAATTVHGQGTRFDFYRDTCPKVEFIVRSTVRSHFRLDPSIAPGLLRMHSHDCFVRGCDASVLLSGPNSERTAVPNRTLKGFEVIDDAKSQLEDVCPGVVSCADILALAARDSVVLTGGLGWEVPTGRRDGRVSLVSEVKLPGFSDSIEVQKEKFRSMGLNTHDLVTLAGAHTIGTASCRFFSYRLYNFTTVTESGADPTLNPSLVGRLRELCPEDGDGSNRVKLDMDSPEQFDLSFYKNLRHGGGILESDQMLWNDDSTRPIVRHYLGMRILRGRSSFRVEFGRSMVKMSNAQVKTGTVGEIRRVCSEVN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 31132415 31134616 - CrPI670011_09g015380.1 Cre09g1538 508206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1538 328 Gene3D - 31 328 - -
Cre09g1538 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 ProSiteProfiles Plant heme peroxidase family profile. 27 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cre09g1538 328 FunFam Peroxidase 159 307 - -
Cre09g1538 328 Gene3D Peroxidase, domain 2 159 307 - -
Cre09g1538 328 SUPERFAMILY Heme-dependent peroxidases 29 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g1538 328 CDD secretory_peroxidase 29 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre09g1538 328 PANTHER PEROXIDASE 25-RELATED 19 324 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cre09g1538 328 FunFam Peroxidase 31 174 - -
Cre09g1538 328 Pfam Peroxidase 44 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0456 Cre-Chr9:4353044 Cre09g1538 Cre-Chr9:31132415 9.00E-64 dispersed
Cre09g1538 Cre-Chr9:31132415 Cre11g0589 Cre-Chr11:2992064 1.00E-59 dispersed
Cre09g1536 Cre-Chr9:31092975 Cre09g1538 Cre-Chr9:31132415 1.10E-119 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1538 K00430 - csv:101202985 578.556