Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1589 ATGTTGTGCCTCCCCCGAAGAATTGATGATTGGCTCATTGAAGGTCTTAATGGTTGGAATTTGATGGGCAAAACTAGGTTCTTGGGTAGCTGTGCTACTAAAGCATCGATGAAGTTATGGGTTCCTCACTGTTTCCTTCTCAATGGGGATGGGGGTTTGATTATTGTGGCAGATGATGTTATTGTTACAGGAGTATTGAGTGCAAAGTGGTCCCCAGACCTCAAAGATGTTCGTTGTGACCTTGATCCAATGCTTATTGCTAATCATGTGAGAAGAACCAATGAACTAAAGGCTGAGGTTGACATCCCTGATGATATAATTATGAAATTTAGGCAGTTCTGGTCAGATTTCAAAGACACTCCTTTAAAAGGAAGAAATGCTATTTTGAGAGGCATATGCCCTCAAGTGTTTGGACTTTTTACTGTAAAACTTGCAGTGGCTTTAACACTCACTGGAGGTGTACAACATGTGGATATTTCTGGTACTAAAGTTCGAGGAGAATCTCATCTACTGTTGGTTGGTGATCCTGGTACTGGAAAGTCACAGTTCCTGAAATTTGCTGCCAAATTGAGCAACCGAGCTGTGATTACCACTGGATTAGGAAGCACTAGCGCAGGACTGACTGTTGCTGCTGTTAAGGATGGAGGGGAATGGATGCTGGAAGCTGGGGCACTTGTACTGGCTGATGGAGGACTTTGTTGCATAGATGAAGTGGACAGCATGAGAGAACATGACAGAGCCACAATCCATGAAGCAATGGAACAACAGACTATAAGTGTCGCAAAGGCTGGTCTTGTCACAACTCTCAGTACTAGAACGATAGTATTTGGCGCAACAAATCCTAAAGGACATTACGACCCTGAACAACCGCTCTCTGTCAATACAACGCTCTCCGGTCCCTTATTGAGTAGATTTGACATCGTTCTTGTGCTTTTAGATACAAAAAACCCTGAATGGGATGCAGTTGTTTCATCTCATATTCTCTCTGAGTGCGAACAAGAAAAGGGAAAGCATGCCAATGACCTTTCAAGTAACTGGCCTCTTACTATGCTTCGAAGATACATCCAATTTGTAAAAGGATACTTCAGACCGGTCCTGACTAAGGAAGCTGAGCAAATTATTTCAAACTATTATCAGCTTCAAAGAAGATCAGCCATGGATAATGCAGCCAGGACAACAGTACGTATGCTTGAAAGCTTGATACGGTTAGCACAAGCACATGCACGCCTTATGTTTAGAAATGAGGTTACCCGGCTCGATGCCATTACGGCTATTTTGTGCATCGAATCATCCATGACGACCTCAGCTTTAGTGGATAGTGTTGGGAATGCCTTGCACTCCAATTTTACCGAGAACCCAGATGAGGAATATGCAAAGCAAGAAATTTTAATACTTGAGAGGCTCAAATCGATGGACGAATAG 1422 42.97 MLCLPRRIDDWLIEGLNGWNLMGKTRFLGSCATKASMKLWVPHCFLLNGDGGLIIVADDVIVTGVLSAKWSPDLKDVRCDLDPMLIANHVRRTNELKAEVDIPDDIIMKFRQFWSDFKDTPLKGRNAILRGICPQVFGLFTVKLAVALTLTGGVQHVDISGTKVRGESHLLLVGDPGTGKSQFLKFAAKLSNRAVITTGLGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPEQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILSECEQEKGKHANDLSSNWPLTMLRRYIQFVKGYFRPVLTKEAEQIISNYYQLQRRSAMDNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSALVDSVGNALHSNFTENPDEEYAKQEILILERLKSMDE 473
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 32386275 32399404 + CrPI670011_09g015890.1 Cre09g1589 508257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1589 473 CDD MCM9 127 431 - -
Cre09g1589 473 SMART mcm 2 433 IPR031327 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 Gene3D - 106 437 IPR027417 -
Cre09g1589 473 ProSiteProfiles MCM family domain profile. 124 327 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 57 461 IPR031327 GO:0000724(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)
Cre09g1589 473 FunFam Probable DNA helicase MCM9 102 436 - -
Cre09g1589 473 PRINTS Mini-chromosome maintenance (MCM) protein family signature 251 264 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 PRINTS Mini-chromosome maintenance (MCM) protein family signature 274 286 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 PRINTS Mini-chromosome maintenance (MCM) protein family signature 165 180 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 PRINTS Mini-chromosome maintenance (MCM) protein family signature 223 237 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 PRINTS Mini-chromosome maintenance (MCM) protein family signature 301 309 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 Pfam MCM P-loop domain 126 329 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cre09g1589 473 SMART AAA_5 166 315 IPR003593 GO:0016887(InterPro)
Cre09g1589 473 Pfam MCM AAA-lid domain 350 431 IPR041562 -
Cre09g1589 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 435 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g1589 Cre-Chr9:32386275 Cre10g1454 Cre-Chr10:28362394 8.90E-57 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1589 K10738 - csv:101205171 786.178