Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1672 ATGGAGAAAAACCAACCTGAGAATCAACATCCTCTTCACAAAACCACTAGCTTCCACGATGCCCCCAAATTGGATGCTGCTGCTGATGATGCCAATCTCACCCCTCCTCTCCCTCCTCTTCTACAAACTGATGCTGCTCTAAAATCTTTGGAGGATCAGGATCAGAATAATCAGAATCAGCATCAGGATCAACCTCAGGATCAGGAGGAGAAGGAGAAGGAGAAGGAGAATGAGAAGGAGAAGGAGGAGGAGGAGAAGAAGGAAGTGGAGGAGGAAGAGAACACCAAGGAAGGGGAGGAAAATACTGAGGTTGAACAATCCAACAACGAACCGGATCTTCATTACAATCTCCATACCATTCTTGAAGATGTCGATCAATTTCTCTCAACTCCTCACGGTTCTCGTGATCGAGAGGAAGATTCTGTTGTTCAAATTCCTCAGTTCATCGACAAATTCTTGGATCTCGTCGATGCCAAGATTGAGCAATACAATAACGACGAATCGAATGCGAAGGAGAAAGAGTGTAGAGTACCGGAGGATGAGTCCACGTTTCTCGAAGCCGTCGATCGGATATCCAAGCTGAAAACTGCAATTCACGAAATGAAATTGGAAGAGGATAAGAATTCGTTGATCAATCGCATCGGGAGCACTCAACAGCGAGCGATTTCTTATTTGGAAGAAGAGTTCAGATTCTTTCTCGAGGAATCTAGAAACAGCGATTCCGATCCTGCTGCCGATACGAAAGGGAAACAAGAACAGGATCGTTCTGCATTACCGGACAATGAATCCGATCAGTTCCAGTTTCCAGGTTACTCCGACGAGATCGTGAACTATTTGAACAAAATCGCTAAGCAAATGATTTCCGGTGGATACGAATCGGAATGCTGCCAAGCCTACATGGTTGCGAGAAGAAACATATTCGAAGACGCCTTGCTGAAGCTCGGATTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCGACATGGATTAGAACCATCAAGCAATGCGCCACCATTTTATTCTCCGGCGAACGGAATCTCGTCGAATCTGTATTTTCATCGTATCCTCCAATGTCCGCCAGTCTGTTTAGCAATCTAACTCGCGGCATTATGATTCAACTCCTAAATTTCTCAGAAGGTGTAGCAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGTGACATGGTCCCAAAAATGGAAGTATTATTTCCAGAAGAATCCGCTAACGAGCTCAAAACAGAAACCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAAAACTCAATCAAAGCAGACACCGGAAAAACTCCGGTACCAGGCGGCGCCGTTCATCCATTAACTCGATACACCATAAACTACTTGAAATACGCTTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGAGCATTCAAAGATCGAACGAGCCGATTCAACAAGTCGACCACATTTCGAAGGCGAACAAGCACCACAATACAACTCTAGCATTGACAATCAATCCCCATTCGCGGTTGAACTGACGCGAGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGATATAGCACTGAGTTCGATTTTCATGATGAACAACGGACGATACATCTTGCAGAAGATCAAAGGATCTGCAGATATCCATGAACTAGTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATTTGCGTCAGTATCACAAGAATTACCAGAGAGAAACGTGGGGGAAGTTGTTAGGTTGTTTGAACCACGAAGGATTAACAGTGCACGGGAAAGTGGTAAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCGCTGTTCGAAGAGATTCATAAAACACAGAGCTCGTGGATCATAAGCGACGAGCAACTTCAATCGGAGCTGCGAGTATCGATATCGGCGGTGATGATTCCGGCGTACAGATCATTCTTAGGGAGGTTTTCGCAGGTTTTGGATCCGGGGAGACAAACAGAGAAATATATAAAGTTCCAGCCTGAAGATATAGAGACATACATAGATGATCTATTTGATGGAAATCCAAGCTCCATGGCAAGAAGGAGAACATAA 2169 44.91 MEKNQPENQHPLHKTTSFHDAPKLDAAADDANLTPPLPPLLQTDAALKSLEDQDQNNQNQHQDQPQDQEEKEKEKENEKEKEEEEKKEVEEEENTKEGEENTEVEQSNNEPDLHYNLHTILEDVDQFLSTPHGSRDREEDSVVQIPQFIDKFLDLVDAKIEQYNNDESNAKEKECRVPEDESTFLEAVDRISKLKTAIHEMKLEEDKNSLINRIGSTQQRAISYLEEEFRFFLEESRNSDSDPAADTKGKQEQDRSALPDNESDQFQFPGYSDEIVNYLNKIAKQMISGGYESECCQAYMVARRNIFEDALLKLGFEKHSIDDIQKMSWESMEREIATWIRTIKQCATILFSGERNLVESVFSSYPPMSASLFSNLTRGIMIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMEVLFPEESANELKTETTTARTRLGEAAICIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKEHSKIERADSTSRPHFEGEQAPQYNSSIDNQSPFAVELTRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSADIHELVGDTWYRKRSSDLRQYHKNYQRETWGKLLGCLNHEGLTVHGKVVKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLGRFSQVLDPGRQTEKYIKFQPEDIETYIDDLFDGNPSSMARRRT 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34462743 34464911 + CrPI670011_09g016720.1 Cre09g1672 508340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1672 722 MobiDBLite consensus disorder prediction 1 117 - -
Cre09g1672 722 MobiDBLite consensus disorder prediction 1 26 - -
Cre09g1672 722 SUPERFAMILY Cullin repeat-like 179 711 IPR016159 -
Cre09g1672 722 Coils Coil 65 102 - -
Cre09g1672 722 MobiDBLite consensus disorder prediction 236 259 - -
Cre09g1672 722 MobiDBLite consensus disorder prediction 48 63 - -
Cre09g1672 722 PANTHER EXOCYST COMPLEX PROTEIN EXO70 85 713 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Cre09g1672 722 Pfam Exo70 exocyst complex subunit C-terminal 338 708 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cre09g1672 722 MobiDBLite consensus disorder prediction 64 84 - -
Cre09g1672 722 MobiDBLite consensus disorder prediction 236 268 - -
Cre09g1672 722 Gene3D Exocyst complex component Exo70 159 720 - -
Cre09g1672 722 Pfam Exocyst complex component Exo70 N-terminal 153 234 - -
Cre09g1672 722 MobiDBLite consensus disorder prediction 85 99 - -
Cre09g1672 722 Coils Coil 153 173 - -
Cre09g1672 722 FunFam Exocyst subunit Exo70 family protein 167 718 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g0365 Cre-Chr3:2033048 Cre09g1672 Cre-Chr9:34462743 8.70E-108 dispersed
Cre07g1891 Cre-Chr7:34355515 Cre09g1672 Cre-Chr9:34462743 4.10E-172 dispersed
Cre07g1981 Cre-Chr7:35220282 Cre09g1672 Cre-Chr9:34462743 8.90E-79 dispersed
Cre09g1672 Cre-Chr9:34462743 Cre10g2192 Cre-Chr10:36441995 1.10E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1672 K07195 - csv:101206040 1161.75