Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1674 | ATGGCGTGCCGGAATCTCCTCCGGCTGTGTTTTTCATCTTTGGTGTTTCTTGTTTTCATATTCTTTCCTGTAGGAGAAGCAGAGGCGGATCTTGCGTCGGACACGGCGGCGCTGGTGGCGCTTCAGAAGGCCATGGGTGTTTTGAGCCGGACTCGCTATTGGAACCTCTCCGAGAAGACTCCATGTTTCTGGCTTGGCGTTACTTGCGGCGGTGGGAGGGTTACTGAACTGCGGCTTCCCGGCGTTGGTCTCGTCGGCCAACTTCCTTTAGGGCTTGGAAATTTAACTCAACTTGAAACCCTGTCTCTTCGCTCTAACATGCTTTCAGGTTCTATTCCGTCTGATTTTGCAAACCTCCGCTCCCTCCGGAACCTCTACTTGCAATGGAACTCGTTTTCCGGCGAGATTCCTCCGGTTCTGTTCAGTATTCAGAGTCTTGTTCGCCTGAATTTGGCCCACAACAAGTTCGTCGGTCCGATTTCATTAGGTTTCAATAATCTCACGAACCTACAGGTTCTCAATTTGGAAGAGAATCAACTCGATGGAATTATTCCTGATTTGAACATTCCCTCGCTCAATGCTCTCAATGTTTCTTTCAATCGTCTCAATGGCTCTATCCCTTCGCGATTTTCCGATCAACCAGCCAATGCCTTCGACGGCAACTCGCTCTGCGGGAAGCCACTGAGCCCTTGCAACAGCGAGAAGAAGAAATTATCCGCTGGAGCAATCGCTGGAATCATTATCGGAAGTTTGATTGTATTCTTGCTCATCGTTCTGATTTTGATCTTTCTGTGCCGGAAGACGATCAAGATTAATCGGCCGAATGATGGTCAGACGATGGCGACAAGCTCCGGGAGATTGTCGTCGGAGGTTGAGAGTGCAGTTGGCGGAAATAGAGGAGGTGGGAATGAGAGGAATTTGGTGTTCTGTAGGAAAGGAGAAAGTGTGTTTGATTTGGAGGAACTGTTGAAAGCTTCTGCAGAGGTATTAGGGAAAGGGAGTTTTGGGTCAACTTACAAGGCAGCTCTGGATGTGGGGATAACTGTGGTGGTTAAGAGGTTGAGAGATGTCAAAGTTTCAGAGGAGGAATTCAAGGAGAAGATTGAAAGCTTGGGGATGATGAATCATCAGAACTTAGTTCCTATTAAGGGTTACTATTATGGCAGAGATGAGAAGCTTCTGCTCTGTGATTATGTCTCCATGGGAAGCTTATCTGTACATTTACATGGCAACAAAGATCCTAGTAGGACTTCATTGAAATGGGAAGCAAGGGTTGGCATTGCACTTGCGGCTGCTCGGGGGATTACGTATCTACATTCTCGACGACCTCCGACCTCTCATGGCAACATAAAGTCTTCAAACATTCTCCTCAACAGATCCCATACAGCTTGTGTCTCTGACTTTGGTCTCATTCAGATTGCAAGTCCTACATCCACTCCAAACCATGTTGCAACCTACCGCGCCCCTGAAGTCACCGATCCTCGTAAAGTATCCCTGAAAGCAGATGTTTACAGTTTTGGTGTGGTAATTCTAGAGCTTCTAACAGGGAAGGCTCCGAACTCGGCAATGCTCAATGACGATGGCGTAGACCTCCCACGATGGGTGCACTCAAAGATCGAAGAGGAGAAGACTGCTGAAGTGTTCGATGAGGAGCTATTAGAATACAAGAATGGCTTGGATGAAATGGTGCAACTTCTGCAACTTGCCATGTTATGTACAGCACCACACCCGGATAGTCGACCTACGATGGCGAAGGTGACGAGTCGAATCGATGAAATATATCATTCGATCTTACTGAAAGAACAAGATACGAGCATCGACAAGTTTTATGATGTGGACAGTACTGTTTCTCAGCAATTTTACTCAGCTGATTCAATCATGATTCCTCTTCCACCTTCGATCTAG | 1905 | 47.09 | MACRNLLRLCFSSLVFLVFIFFPVGEAEADLASDTAALVALQKAMGVLSRTRYWNLSEKTPCFWLGVTCGGGRVTELRLPGVGLVGQLPLGLGNLTQLETLSLRSNMLSGSIPSDFANLRSLRNLYLQWNSFSGEIPPVLFSIQSLVRLNLAHNKFVGPISLGFNNLTNLQVLNLEENQLDGIIPDLNIPSLNALNVSFNRLNGSIPSRFSDQPANAFDGNSLCGKPLSPCNSEKKKLSAGAIAGIIIGSLIVFLLIVLILIFLCRKTIKINRPNDGQTMATSSGRLSSEVESAVGGNRGGGNERNLVFCRKGESVFDLEELLKASAEVLGKGSFGSTYKAALDVGITVVVKRLRDVKVSEEEFKEKIESLGMMNHQNLVPIKGYYYGRDEKLLLCDYVSMGSLSVHLHGNKDPSRTSLKWEARVGIALAAARGITYLHSRRPPTSHGNIKSSNILLNRSHTACVSDFGLIQIASPTSTPNHVATYRAPEVTDPRKVSLKADVYSFGVVILELLTGKAPNSAMLNDDGVDLPRWVHSKIEEEKTAEVFDEELLEYKNGLDEMVQLLQLAMLCTAPHPDSRPTMAKVTSRIDEIYHSILLKEQDTSIDKFYDVDSTVSQQFYSADSIMIPLPPSI | 634 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 34483421 | 34485815 | - | CrPI670011_09g016740.1 | Cre09g1674 | 508342 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1674 | 634 | Gene3D | Ribonuclease Inhibitor | 34 | 142 | IPR032675 | - | |
Cre09g1674 | 634 | Pfam | Leucine rich repeat N-terminal domain | 32 | 69 | IPR013210 | - | |
Cre09g1674 | 634 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 588 | IPR011009 | - | |
Cre09g1674 | 634 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 399 | 603 | - | - | |
Cre09g1674 | 634 | Gene3D | Transferase(Phosphotransferase) domain 1 | 399 | 603 | - | - | |
Cre09g1674 | 634 | Pfam | Protein tyrosine and serine/threonine kinase | 328 | 589 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g1674 | 634 | ProSiteProfiles | Protein kinase domain profile. | 324 | 598 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1674 | 634 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 398 | - | - | |
Cre09g1674 | 634 | ProSitePatterns | Protein kinases ATP-binding region signature. | 330 | 352 | IPR017441 | GO:0005524(InterPro) | |
Cre09g1674 | 634 | SMART | LRR_typ_2 | 95 | 118 | IPR003591 | - | |
Cre09g1674 | 634 | SMART | LRR_typ_2 | 119 | 143 | IPR003591 | - | |
Cre09g1674 | 634 | SMART | LRR_typ_2 | 167 | 190 | IPR003591 | - | |
Cre09g1674 | 634 | Gene3D | Ribonuclease Inhibitor | 143 | 231 | IPR032675 | - | |
Cre09g1674 | 634 | PANTHER | OS05G0588300 PROTEIN | 11 | 596 | IPR050994 | - | |
Cre09g1674 | 634 | FunFam | pollen receptor-like kinase 1 | 294 | 398 | - | - | |
Cre09g1674 | 634 | FunFam | Probable inactive receptor kinase RLK902 | 31 | 188 | - | - | |
Cre09g1674 | 634 | Pfam | Leucine Rich Repeat | 121 | 141 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1674 | 634 | Pfam | Leucine Rich Repeat | 169 | 186 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1674 | 634 | Pfam | Leucine Rich Repeat | 97 | 119 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1674 | 634 | SUPERFAMILY | L domain-like | 46 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g1308 | Cre-Chr5:13846341 | Cre09g1674 | Cre-Chr9:34483421 | 1.30E-135 | dispersed | |
Cre09g1674 | Cre-Chr9:34483421 | Cre11g0754 | Cre-Chr11:4739809 | 6.50E-103 | dispersed | |
Cre09g1674 | Cre-Chr9:34483421 | Cre01g1386 | Cre-Chr1:27109836 | 6.20E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64413 | PF07714 | PK_Tyr_Ser-Thr | 2.40E-35 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1674 | - | - | - | 0.0 |