Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1680 | ATGGTTCTCTCCAAGACTGCTTCTCAGACCGATGTCTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGATTCAAAATGCCGGAAAATTCGATTCCCAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTGGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACTTTTTTTTTATCTCTCTGTTAGCTTCAATCGAAAGACTAGATCCATTTTTCGTTCCATCGTTTCTCTCCATGAACGGTTATTTTCCTCTGGAAATTCTCCTGAATTGGGAATTGCAGCGTTTTCGGTGGTTGCGGAATTCTACGACCGAGATTAA | 450 | 44.44 | MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQVLFFYLSVSFNRKTRSIFRSIVSLHERLFSSGNSPELGIAAFSVVAEFYDRD | 149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 34561921 | 34562534 | - | CrPI670011_09g016800.1 | Cre09g1680 | 508348 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1680 | 149 | Gene3D | - | 1 | 65 | - | - | |
Cre09g1680 | 149 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 97 | IPR010107 | GO:0004351(PANTHER)|GO:0004351(InterPro)|GO:0005829(PANTHER)|GO:0006536(InterPro)|GO:0006538(PANTHER)|GO:0030170(InterPro) | |
Cre09g1680 | 149 | FunFam | Glutamate decarboxylase | 1 | 65 | - | - | |
Cre09g1680 | 149 | Pfam | Pyridoxal-dependent decarboxylase conserved domain | 33 | 99 | IPR002129 | GO:0016830(InterPro)|GO:0019752(InterPro)|GO:0030170(InterPro) | |
Cre09g1680 | 149 | SUPERFAMILY | PLP-dependent transferases | 15 | 97 | IPR015424 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g1680 | Cre-Chr9:34561921 | Cre09g1837 | Cre-Chr9:36730179 | 1.40E-45 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1680 | K01580 | - | csv:101216119 | 193.741 |