Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1687 ATGTCAAAAGAGGAGGTTATTATTTTGGACTGTTTGATCAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGGGAAGAGGATTTGTTTGGTTTGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCAAACCCTATTTATAAGAAAGTGCCTGTTCTCTTGCATAATGGCAAGCCATTGAATGAAAGTTCTATTATTGTCAACTATATTGATGAGACTTGGCCATCTTCTTCCCCACTTCTTCCTTCTTCGCCCTACGAAAGAGCTCAAGCTCGGTTCTGGATTGACTACATCGATAAAAAGGTATTTGATGTGGGTTCCAAGATTTGGAAGAGCAATGGAGAAGAGCAAGAGGCAGCCAAGAAAGAGTTGATAGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGTGACAAAGATTTCTTTGGAGGGGAAAGGTTTGGGATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCAATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAACATTGCCCTAAATTCTCAGCTTGGGAAAAGAGATGTTTGCAAAAGGAGACTGTTGCAAGTGTTATCCCTTGCCCTGAGAAGATCTATAACTTTCTCACCTCCATGAGAAACAACCTTGGCCTTGAATAG 675 40.59 MSKEEVIILDCLISPFCNRVKIALNEKGVSYESREEDLFGLKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIDETWPSSSPLLPSSPYERAQARFWIDYIDKKVFDVGSKIWKSNGEEQEAAKKELIEILKQLEEALGDKDFFGGERFGIVDVIAIPFTSWFNAYEKVGNFKVEEHCPKFSAWEKRCLQKETVASVIPCPEKIYNFLTSMRNNLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34714983 34716451 + CrPI670011_09g016870.1 Cre09g1687 508355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1687 224 CDD GST_N_Tau 6 83 - -
Cre09g1687 224 Pfam Glutathione S-transferase, C-terminal domain 119 197 IPR004046 -
Cre09g1687 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Cre09g1687 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cre09g1687 224 CDD GST_C_Tau 95 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cre09g1687 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Cre09g1687 224 ProSiteProfiles Glutaredoxin domain profile. 1 97 - -
Cre09g1687 224 Coils Coil 123 146 - -
Cre09g1687 224 Gene3D - 93 224 - -
Cre09g1687 224 Gene3D Glutaredoxin 2 92 - -
Cre09g1687 224 Pfam Glutathione S-transferase, N-terminal domain 11 84 IPR004045 -
Cre09g1687 224 FunFam Tau class glutathione S-transferase 1 92 - -
Cre09g1687 224 SFLD Main (cytGST) 2 221 - -
Cre09g1687 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cre09g1687 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Cre09g1687 224 FunFam Glutathione S-transferase U20 93 224 - -
Cre09g1687 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1424 Cre-Chr7:29277902 Cre09g1687 Cre-Chr9:34714983 2.70E-64 dispersed
Cre07g1425 Cre-Chr7:29280418 Cre09g1687 Cre-Chr9:34714983 3.60E-69 dispersed
Cre07g1426 Cre-Chr7:29284880 Cre09g1687 Cre-Chr9:34714983 3.00E-57 dispersed
Cre09g1687 Cre-Chr9:34714983 Cre05g2601 Cre-Chr5:37106836 2.10E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1687 K00799 - csv:101213628 412.92