Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1721 | ATGCAGCAGATGGGGCAGCCCAGCCGCCCCTCCCCCCTAGCCGCCTACCTACTCGCCTGGCGTGCATCCGGTTCGGTCAACAATAAGAGATTCTGTCCTCCACAGGTCTCGTCCCGTCGTCGCAGAGAATCCGCCGCAGGTCCCGTCGCGTCATCGCAAAGGTTCCCTGCCGCCGCTGCGGCTGCAGTCGCCCGTGACCTATTTGTAAAGAGAGCAGCCAGTATGTTCTTCCACATAGTTTTAGAGAGGAATATGCAGCTACATCCACGGCACTTTGGCCGTAACCTCCGTGAGAACCTCGTCTCAAAACTTATGAAAGATGTTGAAGGCACTTGCAGTGGCCGACATGGTTTTGTTGTGGCAATTACGGGAATTGAGAATATTGGGAAAGGGTTGATCCGTGATGGAACAGGTTTTGTCACTTTTCCTGTTAAGTACCAATGTGTCGTGTTTAGACCATTCAAGGGAGAAATTTTAGAAGCCGTTGTTACTATGGTAAATAAGATGGGTTTCTTTGCTGAAGCTGGACCTGTTCAGATTTTTGTTTCAAACCATTTGATACCAGATGATATGGAGTTCCAGTCTGGAGATGTGCCAAACTATACCACCTCGGATGGATCAGTTAAGATTCAGAAAGACAGTGAAGTTCGATTAAAGATAATTGGGACTCGAGTAGATGCAACTGAAATTCTTGTAAACAAAGCTGTAATGGCGAGCCGATACTGGATGGTCTCTTTACCTGTTCAAGGCTCCGCTTCTTCCCTTTGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTCCGTGTTGGAACGCTCGATTCGCTCCTTTCTCTCAGCGATGATCTTCTGAAGTCGAACAGCTTTGTGGAAGGAGTTTCTCAGAAGATCAGACGGCAGATCGAGGAACTGGAGAGGGTTTCAGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTATCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCGACAATGTCGCCTCTGAGAGACATTGTGGATAGCATTCACAGTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGTGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTAGCAACCCTTCTAGTGATTGTTCCCAAGTACTCTCAGAAAGAGTGGCTATCTAGCTATGAAACACTGACTAACTATGTGGTTCCCAGGTCTTCGAAGAAGTTATACGAGGATAATGAATATGCCCTTTACACTGTAACACTCTTTAGTCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAAGAGAGTAGAAAACAGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTTTGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTCTGTGCCGTACGTGTGTTTGCTGAGAGTATCCTGAGATATGGTTTACCACCATCCTTCTTGGCATCTGTTTTGGCACCATCTGTTAAAAGTGAGAAGAAAGTAAGATCAATCCTTGAAGGTTTGTGCGACAGTGCCAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGGGATGGTTGGTCTTGGAGGAGATTCTGATGCATACCCATATGTCTCCTTCACAATCAATCTTGCTTAA | 1839 | 45.46 | MQQMGQPSRPSPLAAYLLAWRASGSVNNKRFCPPQVSSRRRRESAAGPVASSQRFPAAAAAAVARDLFVKRAASMFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEILVNKAVMASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIRRQIEELERVSGVESNVLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHSQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLATLLVIVPKYSQKEWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFKTSAREKGFQIREFEYSPEAQESRKQELEKLVQDQESLRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGGGMVGLGGDSDAYPYVSFTINLA | 612 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35447480 | 35463619 | - | CrPI670011_09g017210.1 | Cre09g1721 | 508389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1721 | 612 | SUPERFAMILY | Nucleic acid-binding proteins | 152 | 234 | IPR012340 | - | |
Cre09g1721 | 612 | SUPERFAMILY | Vacuolar ATP synthase subunit C | 237 | 611 | IPR036132 | GO:0015078(InterPro)|GO:0033180(InterPro)|GO:1902600(InterPro) | |
Cre09g1721 | 612 | CDD | S1_RNAPII_Rpb7 | 155 | 230 | - | - | |
Cre09g1721 | 612 | FunFam | DNA-directed RNA polymerase II subunit RPB7 | 75 | 154 | - | - | |
Cre09g1721 | 612 | Pfam | V-ATPase subunit C | 241 | 605 | IPR004907 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Cre09g1721 | 612 | Gene3D | - | 155 | 241 | IPR012340 | - | |
Cre09g1721 | 612 | Gene3D | Vacuolar atp synthase subunit c; domain 1 | 242 | 570 | - | - | |
Cre09g1721 | 612 | Pfam | SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 | 82 | 138 | IPR005576 | GO:0006351(InterPro) | |
Cre09g1721 | 612 | SUPERFAMILY | N-terminal, heterodimerisation domain of RBP7 (RpoE) | 75 | 152 | IPR036898 | - | |
Cre09g1721 | 612 | CDD | RNAP_II_Rpb7_N | 76 | 155 | - | - | |
Cre09g1721 | 612 | FunFam | V-type proton ATPase subunit C | 399 | 487 | - | - | |
Cre09g1721 | 612 | CDD | V-ATPase_C | 241 | 609 | IPR004907 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Cre09g1721 | 612 | Gene3D | - | 277 | 548 | - | - | |
Cre09g1721 | 612 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C | 237 | 611 | IPR004907 | GO:0000221(PANTHER)|GO:0033180(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Cre09g1721 | 612 | Gene3D | - | 399 | 487 | - | - | |
Cre09g1721 | 612 | FunFam | DNA-directed RNA polymerase II subunit RPB7 | 155 | 240 | - | - | |
Cre09g1721 | 612 | Pfam | S1 RNA binding domain | 153 | 230 | IPR003029 | GO:0003676(InterPro) | |
Cre09g1721 | 612 | Gene3D | - | 74 | 154 | IPR036898 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1721 | K02148 | - | csv:101221574 | 711.449 |