Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1746 | ATGTCTTCTTCTCTTTCATGGTTCTTCTTCTTTTCCCTCTCCTTTACGTTTTCCGGTACGGCCGCCTCGGTTTCCGATGATGCAATGTCGCTCCTCATGTTTAAGGGCTCGATTTCGCTCGGAGGCTCTGGTGTTCTTCGTGGCTGGAATTTGTCTCTTTCTCACTGCCAGTGGTTTGGAGTTACTTGCGATGGTGTTAACGGTAGAGTTGTTGCGCTGAATATCAGTGGAAATGGTGGTGTTCTGGCGGCGGGTTCTTTACTGGTTGGGAAGTTGAATCCGGCGATTGGAAATCTTGTTGAGCTTCGCGTTTTGTCGCTTCCGAATAATTTGATGTACGGGGAGATTCCGGGGAGTGTTGGTAAGCTTCAGTCGTTGGAGGTTCTAGAGCTTCAGGGGAACAATTTCTCTGGAGAGATTCCAAATCAGATAAGTTCACTTCGATCTCTTCGCCTGCTTAATTTGTCTGATAACTCGTTTTCTGGCTCGATTCCGGGTAAATTGATCGGTTCGACGCGATTAGAAGCAATTGATTTGTCGTACAATCAATTATCTGGTAGTATTCAAGTTGTTGATAATAGATGCGGTGCTTTGAATCATTTGAGGCTTTCGCATAACTTTCTGACTAATAACATTCCGGCGGAGATTGGACAATGTTGGAAACTCAGGACTCTGTTACTCGATGGTAATATATTAGAGGGGCAAATTCCGGCTGAGATCGGCCAAATTTCAGAACTCAGAATTCTTGATGTTTCTAGGAATAGCCTTACCGATTCGATTCCAAAAGGGCTTGGTAATTGCCGGAAGTTGTCACAGATCGTTTTGACGAATTTGAACGATATCAATCCCGACTACGATAGTTTAAGAGGGGAATTCAACGCCTTCAATGGAGGTATTCCTTCTGAGTTGTTATTGCTTCCAAGTCTGCAAGTTTTATGGGCACCGAGAGGGAATTTTAATGGCGAATTGCCGATTAATTGGAGTTCTTCATGCTCGCTTAGAGTTCTCAATTTAGGGCAAAATTACATCACTGGTACAATACCCGAATCGATTGGGAAATGTGCGAATCTAACTTACCTGGATTTATCTTCAAACAAGCTTCAAGGTAACCTCCCCTCCCAGCTTCGAGTTTCATGTATGGCGTATTTCAATGTTAGCCAGAACAAAATTTCTGGTGTTCTTCCCAGATTTGAGAAAGACAGTTTCTGTACGAACTTGATTCCACACGAACCAGCTCCCAGATTCTTAGATCAGGAAGACGATTGGAATTCTTACTTCAATTTTCCTGTTTGGGATTTCCCGAGATTAAATGATAATCTCATAATTTCCCATGATTTTAGCTGGAATAGGTTCAGTGGCTCATTAACTTCAGTCAAAGTGGGAGAAGAGCTTTTGGCTAATGGCCGCAAGTTCTCATACAAATTGTTGCTTAATAGCAACCAGTTCAATGGATCACTTCCCTTTGATCTGGTCTCGAACTGTAACGATATGAAGGGTGTTTCTGTTAACTTGAGTTCAAACTTAGTATCAGGTGAGATTTCTGATGCATTTTTTCTCCATTGTCGACAAATGATAGAGTTTGAGGCAGCAAGCAATGAATTAGATAACCCGATTGGACCTCAAATTGGCGACTTGCAGACGCTTCTTCGTCTCGACTTGAGAGGGAATAGATTGTCTGGAGTTTTACCTGATCAGTTGGGAAACTTGCAGAGTTTGAAATGGATGCTTTTGGGGGGAAACAATTTGACCGGAGAGATTCCATCTCGACTTAGTCGATTGACTTCTCTCGTGAGTTTAGATCTTTCTCGGAACATGTTTACAGGAGTTATCCCTGAAAGCTTCTCATATGCTTCAAGACTTGAGATTCTGTTGCTTGATCATAATAGGTTAACTGGGGAAATACCAGCATCTTTCTCTGCCCTTTCACATCTCACTAAATTGGATGTCTCTTTTAACAACCTTTCTGGCCACATTCCTCATCTTCAGCACACATTTGACTGCATTTACTTTGGTGGGAATAAGTTTCTGCATCCATGCCCAGATTCATACTCCGACTCCCCAGCTGGACTTCCGGTTCCTCTCGACGTTGCAAAGTGGAAGAGACGAAGAAAGTTTATGTCCATGATAATCGCTGTGGCTGCCTCCTCAAGTCTAATTTGCTTACTCATAATGATAGCTGTTATCATCATTGTTAAGAGAAGGCTAGGTAAACAAAATACGTTAAAGAAGAAACAAGTGGTGACTTTCTCAGATGCTCCTTCCGATCTGAATTATGATAACGTGGTCCGAGCTACCGAAAATTTCAGCCTTCGTTACCTTATCGGTACCGGTGGCTTCGGATCAACATACAAGGCTGAACTGCCCTCAGGTTTCCTTGTTGCTGTAAAGAGACTGTCCATTGGTAGGTTTCAAGGAGGCATCCAACAATTTGACGCAGAAATTCGAACTTTGGGAAGAATACGACACAAAAACCTCGTAACTCTTCTCGGGTATTACGTTGGAGAGGCTGAAATGTTCTTAGTTTACAACTATCTTTCTGGTGGGAACCTTGATACTTTCATTCACGAAAAATCTTGCAAACACGTAAAGCACTCAGTGATCCACAAGATCACTTTGGACATAGCGAGGGCTCTTGCATACCTTCATTACTCCTGTGATCCTAGGATTGTTCATAGAGACATCAAGCCTAGTAACATCTTGCTTGATGAAGACCACAACACCTACATATCAGATTTTGGGTTGGCAAGGCTTCTTGAGGTTTCAGAGACTCATGCCACAACAGATGTGGCAGGAACATTTGGATATGTTGCACCTGAATATGCTACAACTTGTAGGGTCTCGGATAAGGCCGATGTTTATAGCTTTGGAGTTGTGCTACTAGAGTTGCTTTCTGGAAAAAGATCACTCGATCGATCCTTTTCCGACTTTGGGAACGGATTTAACATTGTTACATGGACAAATATGCTGATCAAGGAAGGTCGTTTTTCCGAGCTTTTCACTCCTGAACTTTGGGAAATGGGACCTAAGGAACACTTACTTGGAATGTTAAAGCTCGCTTCCAATTGCACAGTTGAAATTCTCGCTCTTCGACCGTCGATGAAGCAGGTCGTCGAGACACTGAAACAGTTGTAA | 3132 | 42.75 | MSSSLSWFFFFSLSFTFSGTAASVSDDAMSLLMFKGSISLGGSGVLRGWNLSLSHCQWFGVTCDGVNGRVVALNISGNGGVLAAGSLLVGKLNPAIGNLVELRVLSLPNNLMYGEIPGSVGKLQSLEVLELQGNNFSGEIPNQISSLRSLRLLNLSDNSFSGSIPGKLIGSTRLEAIDLSYNQLSGSIQVVDNRCGALNHLRLSHNFLTNNIPAEIGQCWKLRTLLLDGNILEGQIPAEIGQISELRILDVSRNSLTDSIPKGLGNCRKLSQIVLTNLNDINPDYDSLRGEFNAFNGGIPSELLLLPSLQVLWAPRGNFNGELPINWSSSCSLRVLNLGQNYITGTIPESIGKCANLTYLDLSSNKLQGNLPSQLRVSCMAYFNVSQNKISGVLPRFEKDSFCTNLIPHEPAPRFLDQEDDWNSYFNFPVWDFPRLNDNLIISHDFSWNRFSGSLTSVKVGEELLANGRKFSYKLLLNSNQFNGSLPFDLVSNCNDMKGVSVNLSSNLVSGEISDAFFLHCRQMIEFEAASNELDNPIGPQIGDLQTLLRLDLRGNRLSGVLPDQLGNLQSLKWMLLGGNNLTGEIPSRLSRLTSLVSLDLSRNMFTGVIPESFSYASRLEILLLDHNRLTGEIPASFSALSHLTKLDVSFNNLSGHIPHLQHTFDCIYFGGNKFLHPCPDSYSDSPAGLPVPLDVAKWKRRRKFMSMIIAVAASSSLICLLIMIAVIIIVKRRLGKQNTLKKKQVVTFSDAPSDLNYDNVVRATENFSLRYLIGTGGFGSTYKAELPSGFLVAVKRLSIGRFQGGIQQFDAEIRTLGRIRHKNLVTLLGYYVGEAEMFLVYNYLSGGNLDTFIHEKSCKHVKHSVIHKITLDIARALAYLHYSCDPRIVHRDIKPSNILLDEDHNTYISDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELLSGKRSLDRSFSDFGNGFNIVTWTNMLIKEGRFSELFTPELWEMGPKEHLLGMLKLASNCTVEILALRPSMKQVVETLKQL | 1043 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 35817758 | 35820889 | + | CrPI670011_09g017460.1 | Cre09g1746 | 508414 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1746 | 1043 | FunFam | Leucine-rich repeat receptor-like protein kinase | 24 | 190 | - | - | |
Cre09g1746 | 1043 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 439 | 685 | - | - | |
Cre09g1746 | 1043 | Gene3D | Ribonuclease Inhibitor | 287 | 417 | IPR032675 | - | |
Cre09g1746 | 1043 | Gene3D | Ribonuclease Inhibitor | 422 | 688 | IPR032675 | - | |
Cre09g1746 | 1043 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 845 | 1043 | - | - | |
Cre09g1746 | 1043 | Pfam | Protein kinase domain | 773 | 971 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1746 | 1043 | Gene3D | Transferase(Phosphotransferase) domain 1 | 845 | 1043 | - | - | |
Cre09g1746 | 1043 | SMART | serkin_6 | 768 | 1043 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1746 | 1043 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 889 | 901 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g1746 | 1043 | Pfam | Leucine rich repeat N-terminal domain | 25 | 64 | IPR013210 | - | |
Cre09g1746 | 1043 | ProSiteProfiles | Protein kinase domain profile. | 768 | 1043 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g1746 | 1043 | ProSitePatterns | Protein kinases ATP-binding region signature. | 774 | 796 | IPR017441 | GO:0005524(InterPro) | |
Cre09g1746 | 1043 | Gene3D | Ribonuclease Inhibitor | 194 | 286 | IPR032675 | - | |
Cre09g1746 | 1043 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 285 | 371 | - | - | |
Cre09g1746 | 1043 | SUPERFAMILY | L domain-like | 202 | 681 | - | - | |
Cre09g1746 | 1043 | SUPERFAMILY | L domain-like | 24 | 279 | - | - | |
Cre09g1746 | 1043 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 732 | 844 | - | - | |
Cre09g1746 | 1043 | Pfam | Leucine Rich Repeat | 198 | 219 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | Pfam | Leucine Rich Repeat | 246 | 267 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | Pfam | Leucine Rich Repeat | 548 | 569 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 9 | 1042 | IPR050647 | - | |
Cre09g1746 | 1043 | SUPERFAMILY | L domain-like | 475 | 583 | - | - | |
Cre09g1746 | 1043 | Gene3D | Phosphorylase Kinase; domain 1 | 730 | 844 | - | - | |
Cre09g1746 | 1043 | Pfam | Leucine rich repeat | 595 | 654 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | Pfam | Leucine rich repeat | 332 | 367 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | Pfam | Leucine rich repeat | 101 | 159 | IPR001611 | GO:0005515(InterPro) | |
Cre09g1746 | 1043 | Gene3D | Ribonuclease Inhibitor | 26 | 142 | IPR032675 | - | |
Cre09g1746 | 1043 | Gene3D | Ribonuclease Inhibitor | 143 | 193 | IPR032675 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 593 | 616 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 243 | 267 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 641 | 667 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 123 | 146 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 147 | 171 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 545 | 568 | IPR003591 | - | |
Cre09g1746 | 1043 | SMART | LRR_typ_2 | 195 | 219 | IPR003591 | - | |
Cre09g1746 | 1043 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 193 | 282 | - | - | |
Cre09g1746 | 1043 | SUPERFAMILY | Protein kinase-like (PK-like) | 746 | 1040 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g1746 | Cre-Chr9:35817758 | Cre05g2494 | Cre-Chr5:36345912 | 1.70E-60 | dispersed | |
Cre09g1746 | Cre-Chr9:35817758 | Cre07g1976 | Cre-Chr7:35186442 | 5.60E-11 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64415 | PF00069 | Pkinase | 5.20E-44 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1746 | - | - | - | 0.0 |