Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1754 ATGGCGCTCTCTGATAAACCCTCTCGCCAGTCTCTGATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACTCGAACCCTCCCTCTCAAGAAGATGCTTCAATCTTCACCCACTCTCGATGGCGTTTCCTCTCCTACTAAGAGCTTTGTTATTCCCGCCCCCACCGAGCCGTCTAAGAAGATCGAGTTGTACTCGCCAGCCTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTTACGCATATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGATCCTGCGAAATACAAAAGTATTTCGTCTGGTTTTGGAGTTCTGCTTAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGTTGGGTGCCTACTCTCCTTGGATACAGTGCACAGGGTGCTTGCAAGTTTGGCTTTTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCTTGATCTACCTTGCGGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTATCAGATGGACTTCCCAAGTTTGTCAGATCTGAAGGAGCTCTTGGATTGTACAAGGGTATAGTTCCACTCTGGGGACGCCAGATTCCATACACGATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATATAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTATCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAACGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACCCGTGGGCTACCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATCTATGATGCGTTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGCCCTGCACCTGCTGCCCCTGCACCTGCTGCTGCTGAGCTCGCAAAGGCGTGA 1107 48.69 MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPTLDGVSSPTKSFVIPAPTEPSKKIELYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAAAELAKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35914676 35917767 + CrPI670011_09g017540.1 Cre09g1754 508422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1754 368 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Cre09g1754 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cre09g1754 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cre09g1754 368 Gene3D Mitochondrial carrier domain 69 345 IPR023395 -
Cre09g1754 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cre09g1754 368 Pfam Mitochondrial carrier protein 69 154 IPR018108 -
Cre09g1754 368 Pfam Mitochondrial carrier protein 165 252 IPR018108 -
Cre09g1754 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cre09g1754 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 353 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1439 Cre-Chr5:17811377 Cre09g1754 Cre-Chr9:35914676 7.00E-166 dispersed
Cre06g2681 Cre-Chr6:34293797 Cre09g1754 Cre-Chr9:35914676 1.00E-163 dispersed
Cre09g1754 Cre-Chr9:35914676 Cre10g0424 Cre-Chr10:3103829 4.40E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1754 K15102 - csv:101221771 677.552