Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1774 ATGAAGCTGATTGATTGTCTGCTGACACCGCCAAAGCCTGAGAAGAAGCAAAAGAGATGGAAATGGGTGTTTGGAAGGATGAGGAACAAGAGACTAGCCACACTGACAGCACCATCGCCGGCAAAAGTGACAACCAGCCAAGAGGAGGAAGAGGAGAGGAAGCAGGCTCTTTCTGTGGCCATTGCGAGCACTGCAGCGGCCGAGGCGGCAGTTGCAGCAGCTAAAGCTGCTGTTGAGGTTGTTTGGCTCACAGGGACCCCTCAATCTCATCAACAAGAGGCTGCAGATGAAGTCGTTAAGCCTCTCAAGAAGGCCCCTCCATCTGATCTCCTTAAACGTGAAAGGGAAATCCATGATATTGCTGCTATTACTATCCAAACCGCTTTCCGTGGCTTCCTTGCGAGAAAAGCATTGAGAGCATTGAAAGGAATAGTGAGGCTACAGGCAATTATTAGAGGGAGAGCTGTTAGGCGCCAAGCCATTGCCACTTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCACAAGTCCGTTCAAATAGACTTCATCTTCCTCAAAACACTTTCAATTCTCCTGAAACGAAGCAGTTTCAGAGCTTGAAAGATAAGATCATAAAGTTGGATTCGAACGATCAAAGGTGGGATGATAGCCTATTATCAAAAGAAGAAGCAGATTCAGCGTTTTTGAGCAGGAAAGAAGCAGTGATTAGGAGAGAGCGAGTCAAGGAATACTTATTTGCCCACAGGAGGTCTGCAGAATCAGAACGAAAGAAGGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTCGACACCCAACTTTCCAAAAGCAAAGAACTCGAAGATTTGGACTCCATGTTCACCTCAAATCCAAAACACAATGAGATAACAAACGACAGATTCAAAACAAACCCAACAACAAAAAACATGGACAGAACAATAGAAGAACACCCCAACCAATCTCCATCACAAAAACCAGTTCTGAAAAAGCTCTCTCACCACAAGAAGCAACGTTCATTGGAAGGTGGAATAGACTCAAACGGCTCATTTTCAAGCTCCCCACTGGTGCCAACATACATGGCTGCCACTGAATCAGCAAAGGCAAAAGCAAGGTCCTTGAGCTCCCCCAAGCTAAGGCCAGCAGGGGGATTGGACACATGCTCTGATGGGAATTCTCCATGCAAGACAAAGCAGCTCAGTTTGGTGTCTTCAATGGTGAGTGAAGTTGGAATTAGCAGTGGGAGAAGAGGTTTTCATCAGCAGCAAAGATCACCAGGGCTGAAGGGACTTCCAGGGCCAACAAGATCAAGCAGAACTCTCACCAAGGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGATAGACAAAGTGCCTTCCAATGA 1392 46.41 MKLIDCLLTPPKPEKKQKRWKWVFGRMRNKRLATLTAPSPAKVTTSQEEEEERKQALSVAIASTAAAEAAVAAAKAAVEVVWLTGTPQSHQQEAADEVVKPLKKAPPSDLLKREREIHDIAAITIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVRSNRLHLPQNTFNSPETKQFQSLKDKIIKLDSNDQRWDDSLLSKEEADSAFLSRKEAVIRRERVKEYLFAHRRSAESERKKVRGRWRYWLDQWVDTQLSKSKELEDLDSMFTSNPKHNEITNDRFKTNPTTKNMDRTIEEHPNQSPSQKPVLKKLSHHKKQRSLEGGIDSNGSFSSSPLVPTYMAATESAKAKARSLSSPKLRPAGGLDTCSDGNSPCKTKQLSLVSSMVSEVGISSGRRGFHQQQRSPGLKGLPGPTRSSRTLTKDLSIDSEHSLPNWDRQSAFQ 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36133532 36136445 - CrPI670011_09g017740.1 Cre09g1774 508442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1774 463 SMART iq_5 117 139 IPR000048 GO:0005515(InterPro)
Cre09g1774 463 Gene3D - 119 168 - -
Cre09g1774 463 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515(InterPro)
Cre09g1774 463 ProSiteProfiles IQ motif profile. 142 169 - -
Cre09g1774 463 ProSiteProfiles IQ motif profile. 118 146 - -
Cre09g1774 463 MobiDBLite consensus disorder prediction 292 353 - -
Cre09g1774 463 PANTHER IQ-DOMAIN 5-RELATED 18 396 - -
Cre09g1774 463 MobiDBLite consensus disorder prediction 413 463 - -
Cre09g1774 463 Pfam Protein of unknown function (DUF4005) 344 423 IPR025064 -
Cre09g1774 463 MobiDBLite consensus disorder prediction 296 316 - -
Cre09g1774 463 MobiDBLite consensus disorder prediction 435 463 - -
Cre09g1774 463 MobiDBLite consensus disorder prediction 371 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1875 Cre-Chr7:34143412 Cre09g1774 Cre-Chr9:36133532 9.80E-18 dispersed
Cre09g1774 Cre-Chr9:36133532 Cre10g1700 Cre-Chr10:31200951 7.50E-24 dispersed
Cre09g1774 Cre-Chr9:36133532 Cre01g0429 Cre-Chr1:3658142 8.50E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1774 - - - 0.0