Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g1785 | ATGGTTGTTGCTCTTGAAACCACCCGATTCCATGTTCTTGCTGTCGATGATAGCTTCATCGATAGGAAGTTGATTGAACGCCTCCTCAAAACCTCTTCCTATCATGTTACTGCAGTTGATTCCGGTACGAAGGCCTTGGAATTTCTTGGTCTTGTTGAAGATCATGATCACGATGAAGAAACAAACTCCAAAATCGCTCCCTCAAATCATCATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGTGGTTACGAACTCCTTAGGAAGATCAAGGAATCGAAATCTCTCAAAGACATACCAGTTGTGATTATGTCCTCTGAGAATGTTCCTTCAAGAATCAATAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGATGTGAGGAAGTTGAGACCTCATTTGATTAAAGAAAAATCCGCCAGGAATTGA | 477 | 40.88 | MVVALETTRFHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVEDHDHDEETNSKIAPSNHHHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSARN | 158 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 36276213 | 36276950 | - | CrPI670011_09g017850.1 | Cre09g1785 | 508453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g1785 | 158 | ProSiteProfiles | Response regulatory domain profile. | 11 | 151 | IPR001789 | GO:0000160(InterPro) | |
Cre09g1785 | 158 | CDD | REC_typeA_ARR | 12 | 146 | - | - | |
Cre09g1785 | 158 | Pfam | Response regulator receiver domain | 12 | 144 | IPR001789 | GO:0000160(InterPro) | |
Cre09g1785 | 158 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 9 | 153 | IPR045279 | GO:0009736(InterPro) | |
Cre09g1785 | 158 | SMART | REC_2 | 10 | 147 | IPR001789 | GO:0000160(InterPro) | |
Cre09g1785 | 158 | Gene3D | - | 11 | 158 | - | - | |
Cre09g1785 | 158 | SUPERFAMILY | CheY-like | 9 | 149 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2843 | Cre-Chr5:39080935 | Cre09g1785 | Cre-Chr9:36276213 | 4.10E-53 | dispersed | |
Cre08g0534 | Cre-Chr8:17995045 | Cre09g1785 | Cre-Chr9:36276213 | 3.50E-43 | dispersed | |
Cre09g1785 | Cre-Chr9:36276213 | Cre10g1736 | Cre-Chr10:31659739 | 1.10E-51 | dispersed | |
Cre09g1785 | Cre-Chr9:36276213 | Cre05g2664 | Cre-Chr5:37620159 | 2.80E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54398 | PF00072 | Response_reg | 2.00E-20 | CL0304 | Cre | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g1785 | K14492 | - | csv:101210839 | 280.026 |