Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1895 ATGAAGAGGGAACATCACCATCTTCATCCCCGTCCGGAGCCGCTTTCCATGGCTGCCGTCCCTAATGGGGAGAGTTATTTGAACACTGGTAAGGCTAAACTCTGGGAGGAGGAAGCGCAGCTCGATGGAGGAGCGGATGAGCTTCTTGCTGTTTTGGGTTATAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCTCAGAAGCTCGAACAGCTTGAAGAAGCGATGTGCCAAAATCAGGACACTGGCCTTTCGCATCTCGCTTTTGACACTGTTCATTATAATCCCTCTGATCTGTCAACTTGGCTTGAAAGTATGCTCATGGAGCTCCATCCGACGCCTAATTTTGCGCCGCTGCCACCTCCTTCGCAGCTGGACGATTCGTCGTTTTTAGCTCCGGCGGAATCCTCCACCATCACTTCCATTGATTACGACCCCCAACGGCAAACCAGCAACCGGATTTTCGAGGAATCTTCTAGTTCTGATTACGACCTTAAAGCTATCACAAGCAGCGCGATTTATTCACCGAGAGAGAATAAACGTTTGAAATCCTCTGAGTCGGACTCAGACTTGTTCTCCACCTCGGCGATTGGGGCTTCCGATTCTGTAACTCGCCCGGTCGTCCTCGTCGACTCGCAGGAGAATGGAATTCAACTGGTTCATGCTCTGATGGCTTGTGCCGAAGCTGTACAGCAGAACGATCTGAATCTAGCGGAGGCTCTGGTGAAGCGAATCGGTTACTTGGCGGTTTCTCAAGCCGGAGCGATGAGGAAGGTCGCCACGTTCTTCGCCGAAGCGTTGGCACGCCGAATCTACAGGCTCCGCCCTGAGAATCCCCTCGATCATTCAGTGTCCGATAGGCTTCAGATGCATTTCTACGAGAGCTGTCCATATCTGAAATTCGCGCATTTCACCGCGAATCAAGCGATTCTCGAAGCCTTCGAAGGGAAGAAGCGGGTTCACGTAATCGATTTCTCGATGAACCGAGGGATGCAGTGGCCGGCTCTGATTCAAGCCCTAGCTCTACGGCCGAACGGTCCTCCAGCCTTCCGCCTCACTGGAATTGGCCCTCCGGCGCCGGATAACTCAGATTACCTCCAAGAAGTGGGCTGGAAACTCGCTGAATTGGCCGAAGCTATCCATGTGGAGTTCGAGTACAGAGGATTTGTAGCGAATAGCTTGGCGGATCTGGACGCATCGATGCTGGAGCTCCGGCCGAGCGAGGTGGAATCGGTGGTGGTGAACTCAGTGTTTGAGCTGCATAAGTTACTCGCTCGGCCTGGTGCCCTCGAAAAGGTTCTGTCGGTGGTGAAGCAGATGAAGCCGGAGATCATAACGGTGGTGGAGCAGGAAGCGAACCACAACGGTCCGGTTTTCGTGGACCGGTTCACTGAGTCACTCCATTACTACTCGACGCTTTTTGACTCGTTGGAAGGCTCCCCCAACAACCAAGACAAGATCATGTCCGAAATGTACCTTGGGAAGCAAATTTGCAACGTTGTGGCTTGTGAAGGCGCGGACCGAGTGGAACGTCACGAGACCCTGACTCAGTGGCGGACTCGGTTGTCCTCTGCCGGGTTCGAACCCATCCACCTTGGCTCGAACGCATTCAAGCAAGCTAGTATGCTCCTGGCCCTATTCGGCAGCGGAGAAGGCTACCGGGTGGAAGAAAACAACGGATCACTAATGCTAGGGTGGCACACTCGCCCCCTCATCGCCACATCCGCCTGGAAACTCGGCAACAACCCGGTGGTCGCTCACTGA 1761 53.83 MKREHHHLHPRPEPLSMAAVPNGESYLNTGKAKLWEEEAQLDGGADELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQNQDTGLSHLAFDTVHYNPSDLSTWLESMLMELHPTPNFAPLPPPSQLDDSSFLAPAESSTITSIDYDPQRQTSNRIFEESSSSDYDLKAITSSAIYSPRENKRLKSSESDSDLFSTSAIGASDSVTRPVVLVDSQENGIQLVHALMACAEAVQQNDLNLAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYRLRPENPLDHSVSDRLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNRGMQWPALIQALALRPNGPPAFRLTGIGPPAPDNSDYLQEVGWKLAELAEAIHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGALEKVLSVVKQMKPEIITVVEQEANHNGPVFVDRFTESLHYYSTLFDSLEGSPNNQDKIMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLMLGWHTRPLIATSAWKLGNNPVVAH 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37683600 37685360 + CrPI670011_09g018950.1 Cre09g1895 508563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1895 586 MobiDBLite consensus disorder prediction 1 21 - -
Cre09g1895 586 Gene3D - 44 109 IPR038088 -
Cre09g1895 586 ProSiteProfiles GRAS family profile. 209 577 IPR005202 -
Cre09g1895 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 576 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Cre09g1895 586 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Cre09g1895 586 Pfam GRAS domain family 218 577 IPR005202 -
Cre09g1895 586 Coils Coil 54 74 - -
Cre09g1895 586 FunFam DELLA protein GAI 44 109 - -
Cre09g1895 586 SMART DELLA_2 46 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1154 Cre-Chr3:11782839 Cre09g1895 Cre-Chr9:37683600 3.70E-193 dispersed
Cre05g1321 Cre-Chr5:14285757 Cre09g1895 Cre-Chr9:37683600 7.20E-170 dispersed
Cre06g1912 Cre-Chr6:26016054 Cre09g1895 Cre-Chr9:37683600 4.60E-126 dispersed
Cre09g0486 Cre-Chr9:4636630 Cre09g1895 Cre-Chr9:37683600 6.20E-42 dispersed
Cre09g0487 Cre-Chr9:4641485 Cre09g1895 Cre-Chr9:37683600 4.10E-37 dispersed
Cre09g1895 Cre-Chr9:37683600 Cre11g1204 Cre-Chr11:9983798 1.60E-79 dispersed
Cre09g1895 Cre-Chr9:37683600 Cre02g2309 Cre-Chr2:36606469 6.70E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54408 PF03514 GRAS 6.30E-136 CL0063 Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1895 K14494 - csv:101204164 1096.65