Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g1916 ATGACCAAAGAGGAAGATTTTAAGCTACTAAAGTTTCAGACTTGTGATCTCAGAGTGAACATTCACTGTGATGGGTGTAGGCAGAAAGTCAAGAAACTTCTTCAGAGGATAGAAGGAGTGTTTCAGGTTGCCATAGGTGCAGAGAATCAAAAGGTTACCGTTTTAGGAAATGTGGATCCTGCAACTTTGATCAATAAGCTGGTGAGAGCTGGAAAACATGCTGAGCTTTGGTCACAGAAAGTAAACTCGAGCCCGAAACCGAAGAACAAAGACGATAAGACTCCGAACAAGGAACCGAAGCATCTCAAACTGACCTCATTCAACTGTGAAGATGACGACATTGTTGATTGTGTTGAGGAAGGAGAAGATTATGAAGCTGCACAACTTCAGTTCAGAGCAGCTAATCTTGATCTCCTTAGGCAGCAAGCAATGGAAGCGAACAATGCTGGGAAAGGCATTGGGATCAACCGAATTCCCGGGCTTGCCGGGGGAAATGGCAAGATGAACAACAACATCAACATCAACAACAAACCTGGGAATGGAAAGAAAATAGACCCTAATCAGCCAATGGCAATAAAAAACACCCCATCTGAGATTGACCGAAAAACTTTGGCAGCTCTGAAGATGAACAATGCTCAACTATTCGGTAACGGCCGAGAAAGTATCAATCTCGGGGAAGCAAAAAGAGCAAACAACAGCGATTTGAGTTCAATGATGAGCATGGCAGGGTTCAACGGTGGCAACCTTTTGAATTTCGCCACTCCGTCTTCCATTGATGTCAATTCAACAAACACCTCTCAAGGACTTCACCTCCAACAGAACAATGGCTATGGCTACCAGCCATCATCAACCTCTGGATTCTCCATGGCAACTGGTCAATATCATCAACAACAACAACAACAACCAACCTTCATCAATGGCTACAATCAATACCATCAGCAGCAACCATTGATGAACATGAACCACATGGTAAATAGACAAGCAATGAACCAGCAGCCTCAAATGATGTACAATAGAGCTCAATTGGTTCCACCAAACACAGGATATTACTTCAATTACAATCCAAGCCCTGTTCATCCAAGTTATCCTTATGTTCATGGCCACAATAGTAACTCTGCAGCTGAGATGTTCAGTGATGAGAACACAAGCAGCAGTTGCTCAATCATAAATCAGACTTTGATGTCTTGGTGTAAGGTAAGAAAAATCCGCGGCATTTTCATTTTTCATATGGTACCGCCAGAAATGTCCCTTCATCTCACTTATCCACTCCCGATATTCCCTCGCCAGAATGGCCTCCGGACCAAATCTCAGCCATCGCCCGCGAAGTCGATCGTCTCCTGCTCCGCTCTCAAACGCTACACCGCTGGATGTAAAAGGCAGTATACGAGTGTGATGATAGTTCCGACGGGCGTAGGCGCAGCCATTGGTGGATACGCAGGCGACGCTCTCCCGGTTGCTCGTGCCCTCGCCTCCGTCGTCGATTGCCTTATTACTCACCCTAATGTGCTAAATGCAGCAATGCTTTACTGGCCGATGCAAAATGTGCTTTATGTTGAAGGCTATGCACTAGATCGGTTTGCAGAAGGTTCATGGACCCTAGAGCCTGTTCACCAGAATCGGGTAGGATTGGTTATTGATGCTGGAATGGAGGAAGAGCTTCGAATTCGTCACTTGCAAGTGGCTGATGCTGCTAGAGCTTCTCTTGGATTGCCTGTGATGGAATATGTTGTCACAGATACACCTCTAATGGTAGAGAAGTGGATTGATCCAAAAACTGGGCAATCAACTGGGAGGATAAGACATCCTACCTCACTGCTTAGAGCCGTGCAGACATTAATGAACCGGTCGAAGGTGAATGCGGTTGCAGTTGTTGGACGATTCCCAGACGACAATGATGAAGAGACAGATAATTATCGAAAAGGGATGGGAGTTGATACTTTGGCAGGGGTTGAGGCTATTATTAGCCATCTTGTGGTGAAGGAGTTTCAAATTCCATGTGCTCATGCTCCTGCTTTGTCACCTACTCCCTTATGCACATCTCTATCTCCAAAATCAGCAGCAGAGGAGTTAGGATTCACATTCTTACCATGTGTACTTTCTGGGCTAAGTAATGCGCCTCAATACTTGAGCAAGAATTCTCAATCATTGGGGAAGGACTGCATATTGGCAGATGATGTTGATAGTGTCATTGTACCTATAAATGCATGTGGAGGGGATGGCACTCTTGCTTTTGCCAGAAGCAAACAGTACAAGCCACTTATTATTGCGGTCGAGGAAAATGAAACAGTTCTCAGCGATTCTCCAGAGTCACTTGGGATTGAGGCGGTAAAAGTCTCAAATTATTGGGAAGCCATAGTACATCTCCTAATGGCCACGCAGTCTCAAGTGCCCCTCGACAATTCAACTGAGGATCTGTTGAATTCACCTACAAAAGTTGTTTATACATATTCAACACCTACTCACCAGAAAGTGGCAATGAGCAGCGAAGTCGTCGGAGACGGCCAGCGGCGTGCCTTAGCACTGCAACTTCTTGACCTGGTACGTGACTTTGTTCTGATGTCAGGGAGATCGATCGCCGGCGCCGGAGACGTCATGAAGAAAGACTGCACCGATCTCATTCGTCGGATCGCTCTCCTGATTCATCTGGCGGAGGAGATCACAAACTTCTGCAGCGGAAGCAGGGAGAATTTTGAGGCATTGAATGATGATGGGTCTTCTTGTTCGTCTTCTTGGTTGGATTGCCTTTCGGAAGTGGTCGGAGCAATTCAGGCGGCGAAGCGGCTTCTGTACACGGCTTTGACTTTCTCTGTGTGCGACGAGGAGGGTTGTGCGACTTCAACGGAGGGAGCTACTAAAAAATTGGTTCTACAATTCCAATACGTGACAACAAGATTGGAAACTGCACTCTCAAATCTGCCATACGACCACTTTTGTGTCTCAGATGAAGTACAAGAACAGGTTGATTTGGTTAGAGCTCAACTGAGGAGAGCATCAAACAAGTACGAATCTATGTCTAACCCTGAAGAAAAGAAGCTTCAAGCTAGGCCAGGTTCTGTAAAATGGATGATCAGTAATGATGTCAAGAGCATGTCTAGTGTTGATGATGGAGATGTCGAGTCTCAGCATCATCGTCCTCGGAACCGCGACCACTTGACTAGTTTCGATTCGTTGAATTCTTGCTTTGATGAGTGTTCAAGTGTTGTTCATTCTGATATGGAAGATGTTATAGCAAGCAAGAGCCAAGATGAGGTTAAGAAGCCTGTTGAAATTGAAATTCCTGAAAACTTCCTATGCCCCATTTCCTTTGAGTTGATGTTGAATCCCGTCATTGTCTCTACGGGACAGACATATGAAAGATCCAACATACAGAATTGGATAGACAGAGGAAATAGAATATGTCCAAAAACTCAGGAGCAGCTCCAATCTCTGATCCTCACTCCAAATTTTGTTATGAGAAAATTGATCTCTGAATGGTGTGAAGAGCATAATGTGAAGCTAGAGGAAGGATTAACCAACAGGAAACTTAAGAAGTATAGATCATTTGAGGACGATTGCCAAAGGACTGTGCCGATCAAAACTCTGGTTCGAGACCTTTCATTCGGGTCGATTCAGGAGCAGAAGATAGCCGTGACCGAGATCCGAAAGCTATCGAAAAGCAGCTCAGATCATAGAGTTGAAATAGCAGAAGCAGGAGCAATCCCAGAACTGGTTAACCTTTTAACTTCAAAAGATGTTGCAACACAAGAGAATGCAATTTCTTGCATTCTCAACCTTTCACTTCAAGAGCAAAACAAGAGACTTATTATGCTTTCTGGTGCTGTTTCTTACATTTCGCAAGTCCTCAAAGTTGGGAGCATGGAAGGGAGAGAGTGTGCCGCCGCAACAATTTACAGCTTGTCATTAGTCGATGAGAACAAGGCGATAATTGGGGCTTCCGGAGTGATCTCGGACCTGTTAGAAATCCTCGAGATCGGTAGCCCGAGAGGGCAGAAAGATGTTGCAGGAGCTCTATTGAATTTGTGTATGCACCAAGGGAATAAGGGCAGGGCTTTGAAGGCTGGGATTGTCAAACCATTGTTGAAAATGCTCTCTGATTCAAATGGTTCTTTGGTTGATGATGCTCTCTATATAATGTCGGTACTTTGTGGCCATCCAGAGGCGAAGGCTGCGATGTCGAATGCGAATTCATTGCTTGTTTTGACTGACATTCTGAAGACGGGGTCGCCTCGCAGCAAGGAAAATGCAGCTGCTGTTCTGCTTGCATTATGCAAGGGAGATTGGGAGAAGCTGGAATGGTTAACCAGACTTGGCGTGGTGGTGTCGTTGATGAAACTTGCCAATAATGGCACGGCGAGAGCGAGGCGGAAGGCTGCTTTATTGTTGGACCAACTCGGAAAATCATGA 4404 45.3 MTKEEDFKLLKFQTCDLRVNIHCDGCRQKVKKLLQRIEGVFQVAIGAENQKVTVLGNVDPATLINKLVRAGKHAELWSQKVNSSPKPKNKDDKTPNKEPKHLKLTSFNCEDDDIVDCVEEGEDYEAAQLQFRAANLDLLRQQAMEANNAGKGIGINRIPGLAGGNGKMNNNININNKPGNGKKIDPNQPMAIKNTPSEIDRKTLAALKMNNAQLFGNGRESINLGEAKRANNSDLSSMMSMAGFNGGNLLNFATPSSIDVNSTNTSQGLHLQQNNGYGYQPSSTSGFSMATGQYHQQQQQQPTFINGYNQYHQQQPLMNMNHMVNRQAMNQQPQMMYNRAQLVPPNTGYYFNYNPSPVHPSYPYVHGHNSNSAAEMFSDENTSSSCSIINQTLMSWCKVRKIRGIFIFHMVPPEMSLHLTYPLPIFPRQNGLRTKSQPSPAKSIVSCSALKRYTAGCKRQYTSVMIVPTGVGAAIGGYAGDALPVARALASVVDCLITHPNVLNAAMLYWPMQNVLYVEGYALDRFAEGSWTLEPVHQNRVGLVIDAGMEEELRIRHLQVADAARASLGLPVMEYVVTDTPLMVEKWIDPKTGQSTGRIRHPTSLLRAVQTLMNRSKVNAVAVVGRFPDDNDEETDNYRKGMGVDTLAGVEAIISHLVVKEFQIPCAHAPALSPTPLCTSLSPKSAAEELGFTFLPCVLSGLSNAPQYLSKNSQSLGKDCILADDVDSVIVPINACGGDGTLAFARSKQYKPLIIAVEENETVLSDSPESLGIEAVKVSNYWEAIVHLLMATQSQVPLDNSTEDLLNSPTKVVYTYSTPTHQKVAMSSEVVGDGQRRALALQLLDLVRDFVLMSGRSIAGAGDVMKKDCTDLIRRIALLIHLAEEITNFCSGSRENFEALNDDGSSCSSSWLDCLSEVVGAIQAAKRLLYTALTFSVCDEEGCATSTEGATKKLVLQFQYVTTRLETALSNLPYDHFCVSDEVQEQVDLVRAQLRRASNKYESMSNPEEKKLQARPGSVKWMISNDVKSMSSVDDGDVESQHHRPRNRDHLTSFDSLNSCFDECSSVVHSDMEDVIASKSQDEVKKPVEIEIPENFLCPISFELMLNPVIVSTGQTYERSNIQNWIDRGNRICPKTQEQLQSLILTPNFVMRKLISEWCEEHNVKLEEGLTNRKLKKYRSFEDDCQRTVPIKTLVRDLSFGSIQEQKIAVTEIRKLSKSSSDHRVEIAEAGAIPELVNLLTSKDVATQENAISCILNLSLQEQNKRLIMLSGAVSYISQVLKVGSMEGRECAAATIYSLSLVDENKAIIGASGVISDLLEILEIGSPRGQKDVAGALLNLCMHQGNKGRALKAGIVKPLLKMLSDSNGSLVDDALYIMSVLCGHPEAKAAMSNANSLLVLTDILKTGSPRSKENAAAVLLALCKGDWEKLEWLTRLGVVVSLMKLANNGTARARRKAALLLDQLGKS 1467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 37892964 37907186 + CrPI670011_09g019160.1 Cre09g1916 508584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g1916 1467 MobiDBLite consensus disorder prediction 76 100 - -
Cre09g1916 1467 Pfam Protein of unknown function (DUF3326) 462 793 IPR021763 -
Cre09g1916 1467 MobiDBLite consensus disorder prediction 85 100 - -
Cre09g1916 1467 Pfam Heavy-metal-associated domain 17 73 IPR006121 GO:0046872(InterPro)
Cre09g1916 1467 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872(InterPro)
Cre09g1916 1467 SUPERFAMILY RING/U-box 1087 1165 - -
Cre09g1916 1467 Pfam U-box domain 1092 1163 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cre09g1916 1467 CDD HMA 16 75 IPR006121 GO:0046872(InterPro)
Cre09g1916 1467 Gene3D - 12 83 - -
Cre09g1916 1467 Pfam Armadillo/beta-catenin-like repeat 1220 1259 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SUPERFAMILY HMA, heavy metal-associated domain 14 78 IPR036163 GO:0046872(InterPro)
Cre09g1916 1467 Gene3D - 1189 1466 IPR011989 -
Cre09g1916 1467 ProSiteProfiles U-box domain profile. 1091 1165 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cre09g1916 1467 CDD RING-Ubox_PUB 1093 1145 IPR045210 -
Cre09g1916 1467 SUPERFAMILY ARM repeat 1191 1464 IPR016024 -
Cre09g1916 1467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1091 1167 IPR013083 -
Cre09g1916 1467 SMART arm_5 1261 1301 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SMART arm_5 1384 1424 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SMART arm_5 1343 1383 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SMART arm_5 1220 1260 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SMART arm_5 1302 1342 IPR000225 GO:0005515(InterPro)
Cre09g1916 1467 SMART Ubox_2 1095 1158 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cre09g1916 1467 Coils Coil 980 1000 - -
Cre09g1916 1467 PANTHER OS01G0127400 PROTEIN 433 801 IPR021763 -
Cre09g1916 1467 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1231 1273 IPR000225 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0666 Cre-Chr5:5872426 Cre09g1916 Cre-Chr9:37892964 1.30E-21 dispersed
Cre06g1336 Cre-Chr6:7394318 Cre09g1916 Cre-Chr9:37892964 9.30E-22 dispersed
Cre07g1008 Cre-Chr7:12813482 Cre09g1916 Cre-Chr9:37892964 3.70E-101 dispersed
Cre09g0643 Cre-Chr9:6081089 Cre09g1916 Cre-Chr9:37892964 9.30E-07 dispersed
Cre09g1916 Cre-Chr9:37892964 Cre11g1087 Cre-Chr11:8331211 2.60E-38 dispersed
Cre09g1916 Cre-Chr9:37892964 Cre02g2329 Cre-Chr2:36774721 3.00E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g1916 - - - 0.0