Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g1984 | ATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAACAGTGGAATTTCCAAGGCCAACAGCAAAGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCCTTTCTCACGGATCCCTCGACCTTCAAGATGATTATGGAGCGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGTCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAAACTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAAGCTGGAAAAGTGCAGTTGGAGTGCTTGTGGGATTCTCGAGTTTAA | 384 | 48.18 | MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSLDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGKVQLECLWDSRV | 127 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 38815167 | 38816659 | + | CrPI670011_09g019840.1 | Cre09g1984 | 508652 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g1984 | 127 | MobiDBLite | consensus disorder prediction | 17 | 46 | - | - | |
| Cre09g1984 | 127 | Pfam | DNA polymerase delta, subunit 4 | 63 | 113 | IPR007218 | GO:0000731(InterPro)|GO:0006260(InterPro) | |
| Cre09g1984 | 127 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cre09g1984 | 127 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 4 | 1 | 126 | IPR007218 | GO:0000731(InterPro)|GO:0000731(PANTHER)|GO:0003887(PANTHER)|GO:0006260(InterPro)|GO:0006261(PANTHER)|GO:0043625(PANTHER) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g1984 | K03505 | - | csv:101209940 | 227.254 |