Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2044 ATGGGTTTGGACAAAGCACTGGCGCCCTATATTCTCCTCGCCACCATGCTGATCCTCGTGGGGCCAACCACGGCGCAGTTGAGCCCGACGTTCTACGACACCACATGCCCTAACTTATCCTCCATTGTAGAAGATGTAGTTAGACAAGCTCTCCAAACCGATGCCCGAGCAGGCGCAAAACTCATTCGCTTTCATTTTCACGACTGTTTTGTCAATGGTTGTGATGGATCTGTCCTATTGGAAGATTCAGTTGAAGACAACATAGACAGTGAGCAAAACGCTCCGGGAAATGAAGGAATACAAGGCCAAAATATTGTTGCCGACATCAAGACTGCAGTTGAAAATGTTTGTCCAAACCTAGTCTCCTGTGCTGACATCTTAGCCATTGCATCTAATTCAGCTGTCGTCTTGGCTGGAGGAAGGGGTTGGGAGGTTCAACTAGGAAGAAGAGACAGTCTAATAGCAAATAGATCTGGAGCTGAAAGTAATCTTCCAAGTCCTTTTGAACCACTTGCAAATCTTACCGTCAAGTTTGCAAATGTTGGTCTTGATTCTACTGACCTTGTCGCTTTATCCGGAGCGCACACGTTCGGTCGTTCAAGATGCCGATTCTTCCAACGGCGATTGAACGACTTCAACGGAACAGGAATGCCTGATCCGAGTCTAGACCCAATCTACAGAGACGTTCTTTTGGAGGCATGTCCTGAAGGCGGAGACAACAATCGGGTAAACTTGGATCCGACAACTCCAGACGCATTCGACAACAATTATTTCACCAATCTCCAAGGAAACCGTGGGCTTCTTACCAGCGACCAAGTGCTGTTCTCCCCTGCCGGCGCCGCCACCGCCGGCGATGTGAACCGGTTCGCCGCCAGCCAAGATGTGTTCTTTGATGCCTTTGGAGCCTCCATGATTAAGATGGGAAATATTAGGCCTTTGACTGCAAATGATGGGGAGATTCGTTTGACTTGTTCTAGGATCAATCCTTTGCCTACTCTTGCTGATATGTAA 1011 48.17 MGLDKALAPYILLATMLILVGPTTAQLSPTFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVEDNIDSEQNAPGNEGIQGQNIVADIKTAVENVCPNLVSCADILAIASNSAVVLAGGRGWEVQLGRRDSLIANRSGAESNLPSPFEPLANLTVKFANVGLDSTDLVALSGAHTFGRSRCRFFQRRLNDFNGTGMPDPSLDPIYRDVLLEACPEGGDNNRVNLDPTTPDAFDNNYFTNLQGNRGLLTSDQVLFSPAGAATAGDVNRFAASQDVFFDAFGASMIKMGNIRPLTANDGEIRLTCSRINPLPTLADM 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39542773 39546270 - CrPI670011_09g020440.1 Cre09g2044 508712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2044 336 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 Gene3D - 31 328 - -
Cre09g2044 336 Gene3D Peroxidase, domain 2 165 307 - -
Cre09g2044 336 FunFam Peroxidase 30 173 - -
Cre09g2044 336 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PANTHER PEROXIDASE 72-RELATED 15 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 FunFam Peroxidase 165 307 - -
Cre09g2044 336 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cre09g2044 336 Pfam Peroxidase 43 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cre09g2044 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g2671 Cre-Chr2:39950273 Cre09g2044 Cre-Chr9:39542773 2.70E-116 dispersed
Cre02g2678 Cre-Chr2:40006264 Cre09g2044 Cre-Chr9:39542773 6.60E-104 dispersed
Cre02g2679 Cre-Chr2:40015964 Cre09g2044 Cre-Chr9:39542773 3.00E-109 dispersed
Cre09g2044 Cre-Chr9:39542773 Cre11g0563 Cre-Chr11:2663100 2.00E-66 dispersed
Cre09g2044 Cre-Chr9:39542773 Cre11g1063 Cre-Chr11:8063455 1.20E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2044 K00430 - csv:101215530 589.341