Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2059 ATGCTCAAACTAATTCTTCTCGTTGCTTCGGCCACCATTTTCCTCCTTCTCCTAATTTCCATCTTCATTTTTCGCCTTAAACTCTCTAAAAATCACCACATCCGCAACCCTTCCCCCAATAAGAACAAGAAAACAGAGCACACGCCGCCGGAGCTCACCACTTTTGAGGGCGGCGAAGATTTGACGATCGACGAAATTCTAGAAGCTCCTGGGGAAGTGATCGGAAAATCCCATTATGGAACTCTGTATAAGGCTACGTTACAGAGCACCCAAACCACCCGGCTACTCAGATTCCTCCGCCCGGCCGCTGGCGGAGGAGACCATAATGACGACGTCGTTCGGTTTCTGGGTTCGATTCGGCACCGGAATTTGGTCCCGTTGCTGGGATTCTACGCCGGCGGGAGGGGCGAGAAGCTTCTGATTCATCCGTTCTACGAGCAGGGGAATTTGGCGGAGTTCATTAGAGGTGAAACAGAATCAAAAAATTGGGAGGTCATTTACAGAATCTCCATCGGAATCGCAAAAGCCCTGCATCATCTTCACAACGGATTACAAAAACCAATCCCTCACGGAAATCTCAACTCCAACAACATTCTTCTCGATCAAAATCTGCATCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCACGTTTCCGCCGCCGCTGGCTACAAAGCGCCGGAACTTATCAAAATGACCGACGCTGATGAACGCACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCTGCCAAAGAGCCCACGATTCGACATCCGGTTGCTACCGGCGATTCCGGCGTTTCTGAAAATCGGATTCTCCGATGCATTCTTCAGATCGGCGAGGTTTGTTGTCGTTCTTCGCCGAATCTTCGGCCGGATTTCAAAGAAGTGATTGCTAAGATCGAAGAAATCGGAAGGATTGAGATGGACTAA 972 50.41 MLKLILLVASATIFLLLLISIFIFRLKLSKNHHIRNPSPNKNKKTEHTPPELTTFEGGEDLTIDEILEAPGEVIGKSHYGTLYKATLQSTQTTRLLRFLRPAAGGGDHNDDVVRFLGSIRHRNLVPLLGFYAGGRGEKLLIHPFYEQGNLAEFIRGETESKNWEVIYRISIGIAKALHHLHNGLQKPIPHGNLNSNNILLDQNLHPHVSDFGLHLLLNAAATREMLHVSAAAGYKAPELIKMTDADERTDVYSYGKILLELLSAKEPTIRHPVATGDSGVSENRILRCILQIGEVCCRSSPNLRPDFKEVIAKIEEIGRIEMD 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 39651786 39655786 + CrPI670011_09g020590.1 Cre09g2059 508727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2059 323 ProSiteProfiles Protein kinase domain profile. 68 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g2059 323 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 268 IPR052451 -
Cre09g2059 323 SUPERFAMILY Protein kinase-like (PK-like) 71 315 IPR011009 -
Cre09g2059 323 Gene3D Transferase(Phosphotransferase) domain 1 62 323 - -
Cre09g2059 323 Pfam Protein tyrosine and serine/threonine kinase 72 313 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g2059 323 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g2059 Cre-Chr9:39651786 Cre07g0859 Cre-Chr7:7200814 2.10E-41 dispersed
Cre05g0313 Cre-Chr5:2903402 Cre09g2059 Cre-Chr9:39651786 1.20E-23 wgd
Cre07g2031 Cre-Chr7:35904775 Cre09g2059 Cre-Chr9:39651786 3.80E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64427 PF07714 PK_Tyr_Ser-Thr 1.60E-26 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2059 - - - 0.0