Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g2059 | ATGCTCAAACTAATTCTTCTCGTTGCTTCGGCCACCATTTTCCTCCTTCTCCTAATTTCCATCTTCATTTTTCGCCTTAAACTCTCTAAAAATCACCACATCCGCAACCCTTCCCCCAATAAGAACAAGAAAACAGAGCACACGCCGCCGGAGCTCACCACTTTTGAGGGCGGCGAAGATTTGACGATCGACGAAATTCTAGAAGCTCCTGGGGAAGTGATCGGAAAATCCCATTATGGAACTCTGTATAAGGCTACGTTACAGAGCACCCAAACCACCCGGCTACTCAGATTCCTCCGCCCGGCCGCTGGCGGAGGAGACCATAATGACGACGTCGTTCGGTTTCTGGGTTCGATTCGGCACCGGAATTTGGTCCCGTTGCTGGGATTCTACGCCGGCGGGAGGGGCGAGAAGCTTCTGATTCATCCGTTCTACGAGCAGGGGAATTTGGCGGAGTTCATTAGAGGTGAAACAGAATCAAAAAATTGGGAGGTCATTTACAGAATCTCCATCGGAATCGCAAAAGCCCTGCATCATCTTCACAACGGATTACAAAAACCAATCCCTCACGGAAATCTCAACTCCAACAACATTCTTCTCGATCAAAATCTGCATCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCACGTTTCCGCCGCCGCTGGCTACAAAGCGCCGGAACTTATCAAAATGACCGACGCTGATGAACGCACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCTGCCAAAGAGCCCACGATTCGACATCCGGTTGCTACCGGCGATTCCGGCGTTTCTGAAAATCGGATTCTCCGATGCATTCTTCAGATCGGCGAGGTTTGTTGTCGTTCTTCGCCGAATCTTCGGCCGGATTTCAAAGAAGTGATTGCTAAGATCGAAGAAATCGGAAGGATTGAGATGGACTAA | 972 | 50.41 | MLKLILLVASATIFLLLLISIFIFRLKLSKNHHIRNPSPNKNKKTEHTPPELTTFEGGEDLTIDEILEAPGEVIGKSHYGTLYKATLQSTQTTRLLRFLRPAAGGGDHNDDVVRFLGSIRHRNLVPLLGFYAGGRGEKLLIHPFYEQGNLAEFIRGETESKNWEVIYRISIGIAKALHHLHNGLQKPIPHGNLNSNNILLDQNLHPHVSDFGLHLLLNAAATREMLHVSAAAGYKAPELIKMTDADERTDVYSYGKILLELLSAKEPTIRHPVATGDSGVSENRILRCILQIGEVCCRSSPNLRPDFKEVIAKIEEIGRIEMD | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 39651786 | 39655786 | + | CrPI670011_09g020590.1 | Cre09g2059 | 508727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g2059 | 323 | ProSiteProfiles | Protein kinase domain profile. | 68 | 317 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g2059 | 323 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 4 | 268 | IPR052451 | - | |
Cre09g2059 | 323 | SUPERFAMILY | Protein kinase-like (PK-like) | 71 | 315 | IPR011009 | - | |
Cre09g2059 | 323 | Gene3D | Transferase(Phosphotransferase) domain 1 | 62 | 323 | - | - | |
Cre09g2059 | 323 | Pfam | Protein tyrosine and serine/threonine kinase | 72 | 313 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g2059 | 323 | MobiDBLite | consensus disorder prediction | 34 | 54 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g2059 | Cre-Chr9:39651786 | Cre07g0859 | Cre-Chr7:7200814 | 2.10E-41 | dispersed | |
Cre05g0313 | Cre-Chr5:2903402 | Cre09g2059 | Cre-Chr9:39651786 | 1.20E-23 | wgd | |
Cre07g2031 | Cre-Chr7:35904775 | Cre09g2059 | Cre-Chr9:39651786 | 3.80E-84 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64427 | PF07714 | PK_Tyr_Ser-Thr | 1.60E-26 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g2059 | - | - | - | 0.0 |