Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2066 ATGCCTGCGTTTAGTTTCAATGGAGTGGGAGTGATGAACCGAATTATCAAAATTGGTTGCGTTGTTGAAATCTATCTCGATTTCAAGTGGAGAAAACTTAGAACTACTGATGGTAAAACAAACAGCAAATCAGGAGAGTCTCCAAGAAATTGTAATGACACAATTTCTGAGCAGGGATCTCGATCTCCTATTATTTCAAGATCAGTTTCCCCTTCCAGACAAGTTTCAAGATGTCAAAGCTTTTCTGAAAGGCCACAAGCACAACCTCTTCCTCTTCCTGGTTTGCAGCCACCAATTGTAGGTCGTACAGACTCTGGGATTAGTATTTCACCAAAACCAAGATCTGAAAGGGGCTCCAAGCCATCATCATTTCTACCACTTCCAAGACCAGCATGCATTCGTGGGAGGCCAAACCATGCAGATTTAGATGCAGACGTTGGTGTTGGCTCAGTGTCCAGTGAGAGCTCAACTGATAGCACGGATCTATCGGATTCACGCCATCGTAGTCCTCAGGCAACTGACTATGATCTTGGGACTAAAACTGCTGCAGGCAGTCCTTCCAGTGTCATTCTCAAGGATCAGTCTTCTACTGTCACCCAACCAAGTTCGCAAAAGGCCAGCAAACCGGCAAATATCTCATTGAGCAACCACATTTTCTCAACATCACCCAAGCGGAGGCCTTTAAGCAGCCATGTTCCAAATCTGCAAGTTCCATATCATGGGAATTCCTGCATTCCTCCAGAAAGTTCAATGTCAAGTCCTTCTAGAAGTCCCATAAGGGCATTTAGCACAGAGCAAGTTATAAATAATGCTGTCAGTGCTGGGAAGCTCTATATGGATGTCACATTTCCTGGGTCAGGCCATTGTTCCAGTCCTGGTTCTGGTTACAATTCTGGCCATAATTCTATGGGTGGGGATTTGTCAGGGCAGTTATTTTTACAACAAAGTCGGGGTAGCCCTGAATATTCTCCAGCACCCAGTCCCAGAATGACCAGCCCTGGCCCAAGCTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCTAGGGCGGGAGGTATACCCACTGAGTCGCAGACAAGCTGGCCTGATGAGAAGCAAACTCACCGCTTGCCTCTACCTCCGGTTTCAATTTCCAATGCTCCCTTTTCTCATTCCAATTCAGCAGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGGGCTGATAATCCAGCAAGTCCAGGCTCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACTTTTGGTCATGTGTATGTTGGTTTTAACAGTGAAAGTGGTGGAATGTGTGCAATGAAGGAAGTTACATTATTTTCAGATGATGCAAAGTCCAAGGAGAGTGCCAAGCAATTAATGCAAGAAATTACCTTGTTGAGTCGTTTACAGCATCCAAATATTGTGCAGTACTATGGATCTGAAACGGTTGGCGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGAATCAGCACTTCGTATTTATACTAAGCAAATATTGTCTGGGCTTGCATATTTACATGCTACAAATACTGTTCACAGGGATATCAAAGGAGCAAATCTACTTGTCGATCCCACTGGTGTAGTTAAGTTGGCTGACTTTGGGATGGCAAAACATATCACTGGGCAATCATGCCCTTTGTCTTTTAAAGGAAGCCCGTACTGGATGGCACCTGAGGTTATTAAAAACTCAAATGGTTGCAACCTTGCGGTAGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGTCAATATGAGGGAGTCGCTGCAATGTTCAAGATTGGCAACAGCAAAGAACTTCCTGAAATCCCGGATCACCTTTCACATGATGGAAAAGACTTTGTTAGACAATGTTTGCAACGGAATCCTGCTCATCGTCCTACAGCTGCTCAGCTTTTGGAACATCCTTTTGTCAAAGATGTAACAACTCATGAAAGACCGATTTTAGGTTCTGAACATTCAGATCCAACTCCAGGACTTACAAATGGAGTAAGAAGTCTGGGTATTGAGCAAGGAAGGAATCCTAGCTTCTTGGATTCTGATAGACCAGCAGCTCATTCATCTAGACTCACAACAGCTGCTTTCCATTCCAGTGATTTCCATATTCCAAGGAACCTATCATGTCCTGTTTCGCCCATCGGAAGCCCTCTGGTACACTCACGGTCGCCACAACATCCCAGTGGAAGAATGTCTCCATCACCCATCTCCAGCCCTCGTAATATGTCAGGTGCATCCACTCCTCTCACGGGAGGAAGCGGTGCCATTCCACACCAGCATCTCAAGCAATCACTGTACCTGCAGGAGGGTTTTGGGAGCTTGCCAAAGCCTTCAATAGCACCCTATAGTAATGGCCCTTCCTATCACGATAGGAACCCTGACATCTTTCAGGGGATTCAGCCAGGCTCTCACATCTTCTCTGAGCTGGTACACCATGAAACTGATTTTCTGGGTAAGCAGTTTGGAAAGCCTGCCTGGGAATTGTATGACGGGCAGGCGGTCTTGGCTGATCGTGTTTCTAGGCAGCTGCTGAGTGATCACATAACAACTCCCTCCCTGGATTTAAGTCCAAGCTCTCTTTTGACCAACCGCAAATAG 2685 45.74 MPAFSFNGVGVMNRIIKIGCVVEIYLDFKWRKLRTTDGKTNSKSGESPRNCNDTISEQGSRSPIISRSVSPSRQVSRCQSFSERPQAQPLPLPGLQPPIVGRTDSGISISPKPRSERGSKPSSFLPLPRPACIRGRPNHADLDADVGVGSVSSESSTDSTDLSDSRHRSPQATDYDLGTKTAAGSPSSVILKDQSSTVTQPSSQKASKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNSCIPPESSMSSPSRSPIRAFSTEQVINNAVSAGKLYMDVTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTSWPDEKQTHRLPLPPVSISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGGMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLQHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGESALRIYTKQILSGLAYLHATNTVHRDIKGANLLVDPTGVVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLSHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKDVTTHERPILGSEHSDPTPGLTNGVRSLGIEQGRNPSFLDSDRPAAHSSRLTTAAFHSSDFHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSLYLQEGFGSLPKPSIAPYSNGPSYHDRNPDIFQGIQPGSHIFSELVHHETDFLGKQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLSPSSLLTNRK 894
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 39714244 39719836 - CrPI670011_09g020660.1 Cre09g2066 508734
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2066 894 MobiDBLite consensus disorder prediction 287 322 - -
Cre09g2066 894 Pfam Protein kinase domain 413 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g2066 894 MobiDBLite consensus disorder prediction 287 415 - -
Cre09g2066 894 MobiDBLite consensus disorder prediction 174 210 - -
Cre09g2066 894 CDD STKc_MEKK1_plant 411 668 - -
Cre09g2066 894 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 152 674 IPR050538 -
Cre09g2066 894 SUPERFAMILY Protein kinase-like (PK-like) 410 758 IPR011009 -
Cre09g2066 894 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524(InterPro)
Cre09g2066 894 MobiDBLite consensus disorder prediction 379 398 - -
Cre09g2066 894 ProSiteProfiles Protein kinase domain profile. 412 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g2066 894 SMART serkin_6 412 668 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g2066 894 MobiDBLite consensus disorder prediction 678 714 - -
Cre09g2066 894 FunFam Mitogen-activated protein kinase kinase kinase 410 691 - -
Cre09g2066 894 MobiDBLite consensus disorder prediction 40 86 - -
Cre09g2066 894 MobiDBLite consensus disorder prediction 741 786 - -
Cre09g2066 894 Gene3D Transferase(Phosphotransferase) domain 1 410 686 - -
Cre09g2066 894 MobiDBLite consensus disorder prediction 747 782 - -
Cre09g2066 894 MobiDBLite consensus disorder prediction 36 210 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1217 Cre-Chr3:13383490 Cre09g2066 Cre-Chr9:39714244 1.40E-64 dispersed
Cre04g1290 Cre-Chr4:31682778 Cre09g2066 Cre-Chr9:39714244 1.10E-97 dispersed
Cre06g1346 Cre-Chr6:7538686 Cre09g2066 Cre-Chr9:39714244 5.40E-73 dispersed
Cre08g1501 Cre-Chr8:27766371 Cre09g2066 Cre-Chr9:39714244 1.30E-91 dispersed
Cre09g1042 Cre-Chr9:10680609 Cre09g2066 Cre-Chr9:39714244 1.10E-40 dispersed
Cre09g2066 Cre-Chr9:39714244 Cre11g2191 Cre-Chr11:33593124 1.30E-53 dispersed
Cre04g1172 Cre-Chr4:30282237 Cre09g2066 Cre-Chr9:39714244 1.50E-120 transposed
Cre05g1007 Cre-Chr5:9296725 Cre09g2066 Cre-Chr9:39714244 0.00E+00 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64429 PF00069 Pkinase 5.50E-71 CL0016 Cre PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2066 K20717 - csv:101222716 1593.94