Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g2066 | ATGCCTGCGTTTAGTTTCAATGGAGTGGGAGTGATGAACCGAATTATCAAAATTGGTTGCGTTGTTGAAATCTATCTCGATTTCAAGTGGAGAAAACTTAGAACTACTGATGGTAAAACAAACAGCAAATCAGGAGAGTCTCCAAGAAATTGTAATGACACAATTTCTGAGCAGGGATCTCGATCTCCTATTATTTCAAGATCAGTTTCCCCTTCCAGACAAGTTTCAAGATGTCAAAGCTTTTCTGAAAGGCCACAAGCACAACCTCTTCCTCTTCCTGGTTTGCAGCCACCAATTGTAGGTCGTACAGACTCTGGGATTAGTATTTCACCAAAACCAAGATCTGAAAGGGGCTCCAAGCCATCATCATTTCTACCACTTCCAAGACCAGCATGCATTCGTGGGAGGCCAAACCATGCAGATTTAGATGCAGACGTTGGTGTTGGCTCAGTGTCCAGTGAGAGCTCAACTGATAGCACGGATCTATCGGATTCACGCCATCGTAGTCCTCAGGCAACTGACTATGATCTTGGGACTAAAACTGCTGCAGGCAGTCCTTCCAGTGTCATTCTCAAGGATCAGTCTTCTACTGTCACCCAACCAAGTTCGCAAAAGGCCAGCAAACCGGCAAATATCTCATTGAGCAACCACATTTTCTCAACATCACCCAAGCGGAGGCCTTTAAGCAGCCATGTTCCAAATCTGCAAGTTCCATATCATGGGAATTCCTGCATTCCTCCAGAAAGTTCAATGTCAAGTCCTTCTAGAAGTCCCATAAGGGCATTTAGCACAGAGCAAGTTATAAATAATGCTGTCAGTGCTGGGAAGCTCTATATGGATGTCACATTTCCTGGGTCAGGCCATTGTTCCAGTCCTGGTTCTGGTTACAATTCTGGCCATAATTCTATGGGTGGGGATTTGTCAGGGCAGTTATTTTTACAACAAAGTCGGGGTAGCCCTGAATATTCTCCAGCACCCAGTCCCAGAATGACCAGCCCTGGCCCAAGCTCCAGAGTCCATAGTGGTGCAGTGACCCCAATTCATCCTAGGGCGGGAGGTATACCCACTGAGTCGCAGACAAGCTGGCCTGATGAGAAGCAAACTCACCGCTTGCCTCTACCTCCGGTTTCAATTTCCAATGCTCCCTTTTCTCATTCCAATTCAGCAGCAACATCTCCCTCTGTTCCAAGAAGTCCTGGAAGGGCTGATAATCCAGCAAGTCCAGGCTCCCGTTGGAAAAAGGGGAAGCTTTTGGGTAGGGGTACTTTTGGTCATGTGTATGTTGGTTTTAACAGTGAAAGTGGTGGAATGTGTGCAATGAAGGAAGTTACATTATTTTCAGATGATGCAAAGTCCAAGGAGAGTGCCAAGCAATTAATGCAAGAAATTACCTTGTTGAGTCGTTTACAGCATCCAAATATTGTGCAGTACTATGGATCTGAAACGGTTGGCGACAGGCTTTACATTTACCTTGAATATGTATCTGGTGGCTCTATTTACAAGCTTCTCCAGGAATATGGACAGCTTGGAGAATCAGCACTTCGTATTTATACTAAGCAAATATTGTCTGGGCTTGCATATTTACATGCTACAAATACTGTTCACAGGGATATCAAAGGAGCAAATCTACTTGTCGATCCCACTGGTGTAGTTAAGTTGGCTGACTTTGGGATGGCAAAACATATCACTGGGCAATCATGCCCTTTGTCTTTTAAAGGAAGCCCGTACTGGATGGCACCTGAGGTTATTAAAAACTCAAATGGTTGCAACCTTGCGGTAGATATTTGGAGTCTTGGATGCACTGTTTTGGAGATGGCAACAACAAAACCTCCTTGGAGTCAATATGAGGGAGTCGCTGCAATGTTCAAGATTGGCAACAGCAAAGAACTTCCTGAAATCCCGGATCACCTTTCACATGATGGAAAAGACTTTGTTAGACAATGTTTGCAACGGAATCCTGCTCATCGTCCTACAGCTGCTCAGCTTTTGGAACATCCTTTTGTCAAAGATGTAACAACTCATGAAAGACCGATTTTAGGTTCTGAACATTCAGATCCAACTCCAGGACTTACAAATGGAGTAAGAAGTCTGGGTATTGAGCAAGGAAGGAATCCTAGCTTCTTGGATTCTGATAGACCAGCAGCTCATTCATCTAGACTCACAACAGCTGCTTTCCATTCCAGTGATTTCCATATTCCAAGGAACCTATCATGTCCTGTTTCGCCCATCGGAAGCCCTCTGGTACACTCACGGTCGCCACAACATCCCAGTGGAAGAATGTCTCCATCACCCATCTCCAGCCCTCGTAATATGTCAGGTGCATCCACTCCTCTCACGGGAGGAAGCGGTGCCATTCCACACCAGCATCTCAAGCAATCACTGTACCTGCAGGAGGGTTTTGGGAGCTTGCCAAAGCCTTCAATAGCACCCTATAGTAATGGCCCTTCCTATCACGATAGGAACCCTGACATCTTTCAGGGGATTCAGCCAGGCTCTCACATCTTCTCTGAGCTGGTACACCATGAAACTGATTTTCTGGGTAAGCAGTTTGGAAAGCCTGCCTGGGAATTGTATGACGGGCAGGCGGTCTTGGCTGATCGTGTTTCTAGGCAGCTGCTGAGTGATCACATAACAACTCCCTCCCTGGATTTAAGTCCAAGCTCTCTTTTGACCAACCGCAAATAG | 2685 | 45.74 | MPAFSFNGVGVMNRIIKIGCVVEIYLDFKWRKLRTTDGKTNSKSGESPRNCNDTISEQGSRSPIISRSVSPSRQVSRCQSFSERPQAQPLPLPGLQPPIVGRTDSGISISPKPRSERGSKPSSFLPLPRPACIRGRPNHADLDADVGVGSVSSESSTDSTDLSDSRHRSPQATDYDLGTKTAAGSPSSVILKDQSSTVTQPSSQKASKPANISLSNHIFSTSPKRRPLSSHVPNLQVPYHGNSCIPPESSMSSPSRSPIRAFSTEQVINNAVSAGKLYMDVTFPGSGHCSSPGSGYNSGHNSMGGDLSGQLFLQQSRGSPEYSPAPSPRMTSPGPSSRVHSGAVTPIHPRAGGIPTESQTSWPDEKQTHRLPLPPVSISNAPFSHSNSAATSPSVPRSPGRADNPASPGSRWKKGKLLGRGTFGHVYVGFNSESGGMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLQHPNIVQYYGSETVGDRLYIYLEYVSGGSIYKLLQEYGQLGESALRIYTKQILSGLAYLHATNTVHRDIKGANLLVDPTGVVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPEIPDHLSHDGKDFVRQCLQRNPAHRPTAAQLLEHPFVKDVTTHERPILGSEHSDPTPGLTNGVRSLGIEQGRNPSFLDSDRPAAHSSRLTTAAFHSSDFHIPRNLSCPVSPIGSPLVHSRSPQHPSGRMSPSPISSPRNMSGASTPLTGGSGAIPHQHLKQSLYLQEGFGSLPKPSIAPYSNGPSYHDRNPDIFQGIQPGSHIFSELVHHETDFLGKQFGKPAWELYDGQAVLADRVSRQLLSDHITTPSLDLSPSSLLTNRK | 894 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 39714244 | 39719836 | - | CrPI670011_09g020660.1 | Cre09g2066 | 508734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 287 | 322 | - | - | |
Cre09g2066 | 894 | Pfam | Protein kinase domain | 413 | 668 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 287 | 415 | - | - | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 174 | 210 | - | - | |
Cre09g2066 | 894 | CDD | STKc_MEKK1_plant | 411 | 668 | - | - | |
Cre09g2066 | 894 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 152 | 674 | IPR050538 | - | |
Cre09g2066 | 894 | SUPERFAMILY | Protein kinase-like (PK-like) | 410 | 758 | IPR011009 | - | |
Cre09g2066 | 894 | ProSitePatterns | Protein kinases ATP-binding region signature. | 418 | 441 | IPR017441 | GO:0005524(InterPro) | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 379 | 398 | - | - | |
Cre09g2066 | 894 | ProSiteProfiles | Protein kinase domain profile. | 412 | 668 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g2066 | 894 | SMART | serkin_6 | 412 | 668 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 678 | 714 | - | - | |
Cre09g2066 | 894 | FunFam | Mitogen-activated protein kinase kinase kinase | 410 | 691 | - | - | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 40 | 86 | - | - | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 741 | 786 | - | - | |
Cre09g2066 | 894 | Gene3D | Transferase(Phosphotransferase) domain 1 | 410 | 686 | - | - | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 747 | 782 | - | - | |
Cre09g2066 | 894 | MobiDBLite | consensus disorder prediction | 36 | 210 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1217 | Cre-Chr3:13383490 | Cre09g2066 | Cre-Chr9:39714244 | 1.40E-64 | dispersed | |
Cre04g1290 | Cre-Chr4:31682778 | Cre09g2066 | Cre-Chr9:39714244 | 1.10E-97 | dispersed | |
Cre06g1346 | Cre-Chr6:7538686 | Cre09g2066 | Cre-Chr9:39714244 | 5.40E-73 | dispersed | |
Cre08g1501 | Cre-Chr8:27766371 | Cre09g2066 | Cre-Chr9:39714244 | 1.30E-91 | dispersed | |
Cre09g1042 | Cre-Chr9:10680609 | Cre09g2066 | Cre-Chr9:39714244 | 1.10E-40 | dispersed | |
Cre09g2066 | Cre-Chr9:39714244 | Cre11g2191 | Cre-Chr11:33593124 | 1.30E-53 | dispersed | |
Cre04g1172 | Cre-Chr4:30282237 | Cre09g2066 | Cre-Chr9:39714244 | 1.50E-120 | transposed | |
Cre05g1007 | Cre-Chr5:9296725 | Cre09g2066 | Cre-Chr9:39714244 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64429 | PF00069 | Pkinase | 5.50E-71 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g2066 | K20717 | - | csv:101222716 | 1593.94 |