Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2110 ATGATGACGGGAGGAATGGAAGATGCGGTGGTGATCGGAGGATTGATGGCGGTGCAGTTCATTTACGCCGGAAATTCGGTGTTGTTGAGTTATTTAATGTCGTTAGGGCTTAATCCGCTCACCATCGTCGTTTGTTTTGCCTCTACAACTTCTCTGTTTCTCTCTCCTCTCGCTGTTTATTTTGAAAGGAGCAAATGGCCCAAGAAATTGAGTTTTAAGTTGACGCTTCAACTTGTGCTCATCTCCTTTGGCGGAGTGACTTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGTTGACCTCCCCAGCCATGGCTACTGCCATGCCAAACCTGGCTCCTGGTCTCATCTTTATCATTGCTTGGTGTTGTAGATTAGAGAGAGTGAAACTTAGTTGTGTGTACAGCAAAGTAAAGATTTTGGGGACATTGCTTTGTGTAGTAGGTGCTCTAACAATAAGCATAATGCAAAGCACTATTACAATACCAGCAAAAGATCAACTAATAACAACATCTCAACCTACCATTGTACTCTTCAATAAGGAAAAGATTGTTGGTTGTTTGTACTTAATGCTGGCTGTCTTCATACTATCAACCAATGTTGTTTTGCAGGCAAAAGCCCTTGGTGAATTACCAGCTCCAATGTCATTGAGTGCTGTAACATCCTTCATTGGAGTGTTCACCACTGCAGCTGTAATGCTACTCCAAAATCACAACTTACAAACAGATTGGTCAATTCTCAACATCAAGGATTTACTTTCCTATTCTCTTTTTGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGCCCAGTTTTGGTGTCAATTTTCAGTCCCATTGGAACTGTTTTCTCTCTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCTATTGGGAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTATTGTGATGGAAGTGGCTATCAAAGTGATGACTTTGATCTTGAGAAACCTTTACCCTCTTGA 1053 41.79 MMTGGMEDAVVIGGLMAVQFIYAGNSVLLSYLMSLGLNPLTIVVCFASTTSLFLSPLAVYFERSKWPKKLSFKLTLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNLAPGLIFIIAWCCRLERVKLSCVYSKVKILGTLLCVVGALTISIMQSTITIPAKDQLITTSQPTIVLFNKEKIVGCLYLMLAVFILSTNVVLQAKALGELPAPMSLSAVTSFIGVFTTAAVMLLQNHNLQTDWSILNIKDLLSYSLFGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSLILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDLEKPLPS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40090575 40097703 + CrPI670011_09g021100.1 Cre09g2110 508778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2110 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Cre09g2110 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
Cre09g2110 350 PANTHER WAT1-RELATED PROTEIN 16 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g2110 Cre-Chr9:40090575 Cre09g2376 Cre-Chr9:43102513 9.30E-27 dispersed
Cre10g0506 Cre-Chr10:4243638 Cre09g2110 Cre-Chr9:40090575 2.40E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2110 - - - 0.0