Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2114 ATGGCATTCCTTTTTCCCTCATTTTTCTTCTCCACTTTCTTTCTCCTATGCTTTTCCGCCGCCGCCAAGCACCGCCACCACTGGGTCGGACCCACCGGACACCGCCTCATCAAAGTGAACGTTAACGGCGGCTCCGATGAGTTTCTCTCCGTGCAAGCCGCCGTGGATGCAGTTCCCGATTACAATACCGTCAACACCGTCATCCGAATTAGCCCCGGATATTACGTGGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTATATAACATTTGAAGGAGGAGGAAAAGAGACGACGGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAACTCCGTACTTATAGAACAGCCTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCGCTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTCCGAATCTCCGGCGACAAAGCCTACTTTTCCGGCTGCGGATTCTACGGAGCACAAGATACGCTTTGCGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATTGAAGGCTCCATAGACTTCATCTTTGGAAATGGGCGTTCCATGTATAAGGATTGTGAGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCGGCCCAAGATAGAAACTCGCCATCTGAGAAGACCGGGTTTGCTTTTCTCCGGTGCAAAGTGACCGGTTCAGGACCCGTGTACGTGGGGCGAGCCATGGGCCAGTACTCCAGAATCGTCTATGCGTATACTTACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACTGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCAAGTAAAGTAAAGGGAGTATCATGGGCTAGAGAATTGGAGTATGAAGAGGCCCATCCATTTCTTGCCAAAAGCTTTGTCAATGGCAGACACTGGATTGCACCCTCTGATGCTTAG 1020 53.43 MAFLFPSFFFSTFFLLCFSAAAKHRHHWVGPTGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPSEKTGFAFLRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEYEEAHPFLAKSFVNGRHWIAPSDA 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 40129806 40136734 - CrPI670011_09g021140.1 Cre09g2114 508782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2114 339 Pfam Pectinesterase 42 330 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cre09g2114 339 SUPERFAMILY Pectin lyase-like 37 336 IPR011050 -
Cre09g2114 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 335 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cre09g2114 339 FunFam Pectinesterase 32 336 - -
Cre09g2114 339 Gene3D - 35 338 IPR012334 -
Cre09g2114 339 ProSitePatterns Pectinesterase signature 2. 192 201 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre01g0361 Cre-Chr1:3006702 Cre09g2114 Cre-Chr9:40129806 2.50E-78 dispersed
Cre07g1251 Cre-Chr7:26150434 Cre09g2114 Cre-Chr9:40129806 4.00E-84 dispersed
Cre07g1462 Cre-Chr7:29746772 Cre09g2114 Cre-Chr9:40129806 2.40E-71 dispersed
Cre09g0466 Cre-Chr9:4428250 Cre09g2114 Cre-Chr9:40129806 3.50E-67 dispersed
Cre09g2114 Cre-Chr9:40129806 Cre10g2082 Cre-Chr10:35497741 7.30E-45 dispersed
Cre09g2114 Cre-Chr9:40129806 Cre11g0920 Cre-Chr11:6433433 3.10E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2114 - - - 0.0