Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g2114 | ATGGCATTCCTTTTTCCCTCATTTTTCTTCTCCACTTTCTTTCTCCTATGCTTTTCCGCCGCCGCCAAGCACCGCCACCACTGGGTCGGACCCACCGGACACCGCCTCATCAAAGTGAACGTTAACGGCGGCTCCGATGAGTTTCTCTCCGTGCAAGCCGCCGTGGATGCAGTTCCCGATTACAATACCGTCAACACCGTCATCCGAATTAGCCCCGGATATTACGTGGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTATATAACATTTGAAGGAGGAGGAAAAGAGACGACGGTGATAGAATGGCACGACCGGGCAGGTGACCGTGGTCCCAGCGGGCAGCAACTCCGTACTTATAGAACAGCCTCCGTTACCGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCGCTGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTCCGAATCTCCGGCGACAAAGCCTACTTTTCCGGCTGCGGATTCTACGGAGCACAAGATACGCTTTGCGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATTGAAGGCTCCATAGACTTCATCTTTGGAAATGGGCGTTCCATGTATAAGGATTGTGAGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCGGCCCAAGATAGAAACTCGCCATCTGAGAAGACCGGGTTTGCTTTTCTCCGGTGCAAAGTGACCGGTTCAGGACCCGTGTACGTGGGGCGAGCCATGGGCCAGTACTCCAGAATCGTCTATGCGTATACTTACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACGTCAGCAACAAAAACAAGACTGTATTTTTTGGAGTATACAAGTGCTGGGGGCCAGGGGCAAGTAAAGTAAAGGGAGTATCATGGGCTAGAGAATTGGAGTATGAAGAGGCCCATCCATTTCTTGCCAAAAGCTTTGTCAATGGCAGACACTGGATTGCACCCTCTGATGCTTAG | 1020 | 53.43 | MAFLFPSFFFSTFFLLCFSAAAKHRHHWVGPTGHRLIKVNVNGGSDEFLSVQAAVDAVPDYNTVNTVIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPSEKTGFAFLRCKVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWARELEYEEAHPFLAKSFVNGRHWIAPSDA | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 40129806 | 40136734 | - | CrPI670011_09g021140.1 | Cre09g2114 | 508782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g2114 | 339 | Pfam | Pectinesterase | 42 | 330 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cre09g2114 | 339 | SUPERFAMILY | Pectin lyase-like | 37 | 336 | IPR011050 | - | |
Cre09g2114 | 339 | PANTHER | ACYL-COA THIOESTER HYDROLASE YBHC-RELATED | 14 | 335 | - | GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER) | |
Cre09g2114 | 339 | FunFam | Pectinesterase | 32 | 336 | - | - | |
Cre09g2114 | 339 | Gene3D | - | 35 | 338 | IPR012334 | - | |
Cre09g2114 | 339 | ProSitePatterns | Pectinesterase signature 2. | 192 | 201 | IPR033131 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0361 | Cre-Chr1:3006702 | Cre09g2114 | Cre-Chr9:40129806 | 2.50E-78 | dispersed | |
Cre07g1251 | Cre-Chr7:26150434 | Cre09g2114 | Cre-Chr9:40129806 | 4.00E-84 | dispersed | |
Cre07g1462 | Cre-Chr7:29746772 | Cre09g2114 | Cre-Chr9:40129806 | 2.40E-71 | dispersed | |
Cre09g0466 | Cre-Chr9:4428250 | Cre09g2114 | Cre-Chr9:40129806 | 3.50E-67 | dispersed | |
Cre09g2114 | Cre-Chr9:40129806 | Cre10g2082 | Cre-Chr10:35497741 | 7.30E-45 | dispersed | |
Cre09g2114 | Cre-Chr9:40129806 | Cre11g0920 | Cre-Chr11:6433433 | 3.10E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g2114 | - | - | - | 0.0 |