Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2152 ATGGAACAACCCACCTCCATTTCTCCTCTACTTCTCATAAATTCCCTCAATTCCTCAGTTGACCAATCTCCTTTCCTCTTCACCTTCTTCGCCGCTCTTCTAATAATTTTCCTCTATGTAAAACTCACGCGCCGGCGCGTGCCTCTTCCACCTGGTCCCTGGGGCGTTCCACTACTCGGAAACCTCCCATTTCTTGACCCCAATCTTCACACGTACTTTGCCGAATTAGGCCGAAAATATGGCCCAATAGTAAAGCTCCAACTCGGCAATAGAATTGGTATAATCGTAAATTCACCGTCCGTAGCACGTGAAGTGTTGAAAGACCACGATGTTACATTTGCGAATCGCGATGTTCCTCAAGCCGGGAGAGCCGCCTCGTACGGCGGTTCTGACATAGTTTGGACACCGTACGGACCCGAGTGGCGAATGTTGAGAAAAGTTTGTGTGTTAAAGATGCTGAGCAACGCCACTTTGGATAGCGTTTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTACCGGCGATGTGGGTCAGCAGTGAACGTGGGAGAGCAGGGGTTTTTGACGGTTTTCAACGTGGTTACAAGCATGTTGTGGGGTGGTTCAGTGGAAGGAGAGCAGAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACAATTTCGGAAATAACAGAGCTATTGGGAAAACCTAATATTTCGGACTTTTTTCCAAGCTTGGCCCGTTTTGATCTCCAAGGGATTGAGAAGAAGATGCGTGAGATTGCTCCGAGATTTGATAACATTTTCGAAAAGATGATAGATGAACGATTGAAAATTGGTGGTGGAGATGACGACGGGAGTGTCAAGAAAAATGATTTCTTGCAGTTCTTACTTGAAGTTAAAGATGAAGGAGAATCCAGGACTCCTCTCACCATCACCCACCTTAAAGCCTTGCTCATGGATATGGTGGTCGGAGGGACAGACACATCGTCAAATACCATAGAATTTGCGTTGGCAGAAATGATAAAGAACCCAAAAACGCTAAAGAAAGCACAAGAAGAACTCACCGCTGTGGTCGGAGAAGACAACATCGTCGAAGAGTCCCACATTCACAGTTTCCCATATCTGAAGGCCGTAATGAAAGAAACTTTACGTTTACACCCAATTCTACCTCTGCTCGTGCCGCACTGTCCAAGCGAGACCACCATCGTCTCCAATTACGCAATTCCAAAGGGCTCTCGAGTGTTCATCAATGCTTGGGCCATTCAGCGAGACCCCAATCATTGGGAAAATCCATTGGTGTTTGATCCAGAGAGGTTTCTCAAGACCGAGAAGTGGGATTTTGGTGGGAGTGATTTTCGTTACTTCCCATTCGGGTCCGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTACTTGCTACGCTTTTGCATTCTTTTGACTGGAAATTGGAAGATGGTAAGAAGATGGAAGTTGAGGAGAAATTTGGGATTGTTTTGAAGATGAAGTCGCCTCTTGTTCTCATTCCAACGCCAAGGCTATCTAATCCAACTTTGTATCAATAA 1572 46.44 MEQPTSISPLLLINSLNSSVDQSPFLFTFFAALLIIFLYVKLTRRRVPLPPGPWGVPLLGNLPFLDPNLHTYFAELGRKYGPIVKLQLGNRIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYRRCGSAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETISEITELLGKPNISDFFPSLARFDLQGIEKKMREIAPRFDNIFEKMIDERLKIGGGDDDGSVKKNDFLQFLLEVKDEGESRTPLTITHLKALLMDMVVGGTDTSSNTIEFALAEMIKNPKTLKKAQEELTAVVGEDNIVEESHIHSFPYLKAVMKETLRLHPILPLLVPHCPSETTIVSNYAIPKGSRVFINAWAIQRDPNHWENPLVFDPERFLKTEKWDFGGSDFRYFPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLEDGKKMEVEEKFGIVLKMKSPLVLIPTPRLSNPTLYQ 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 40556537 40559612 + CrPI670011_09g021520.1 Cre09g2152 508820
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2152 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre09g2152 523 PANTHER OS08G0547900 PROTEIN 26 523 - -
Cre09g2152 523 FunFam Cytochrome P450 - like protein 39 509 - -
Cre09g2152 523 SUPERFAMILY Cytochrome P450 50 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 Pfam Cytochrome P450 50 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2152 523 CDD CYP76-like 78 512 - -
Cre09g2152 523 Gene3D Cytochrome P450 38 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g2152 Cre-Chr9:40556537 Cre09g2156 Cre-Chr9:40569090 1.40E-124 dispersed
Cre09g2152 Cre-Chr9:40556537 Cre09g2154 Cre-Chr9:40561851 1.40E-07 proximal
Cre09g2151 Cre-Chr9:40550603 Cre09g2152 Cre-Chr9:40556537 3.90E-231 tandem
Cre09g2152 Cre-Chr9:40556537 Cre09g2153 Cre-Chr9:40561166 3.90E-43 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2152 - - - 0.0