Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2262 ATGGATGGTATGGTGGTGGCCGTGGTAGCTGCGGCGGTGGTGACGTACATGATTTGGTTTTTGAATATCAAACGGTCGTTGAGTGGTCCACGTATCTGGCCATTATTGGGCAGTCTTCCAGGTTTGATTGAGAATAGTCATCGTATGCATGATTGGATTGCAGAGAATTTGCGGTCAACGGGTGGCACGTACCAGACTTGTACGTGTGCCATTCCTTTTCTGACAAAAAAGCAAGGTTTGGTGACGGTCACATGCGACCCGAAGAACTTGGAGCATATTTTGAAGACACAATTCGAGAATTACCCAAAAGGGCCTAATTGGCAGGATGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCTGATGGTAATACATGGTTGTTCCAGCGTAAGACTGCTGCACTGGAATTTACTACTAGGACCCTTCGCCAAGCCATGGCTCGTTGGGTTAGTCGAGCTATTAAGTCTCGCTTTTGCCCAATTCTTGAGTCAGCTCAATGTCAGGCCAACTCAGTTGATCTCCAAGACCTTCTACTTCGACTCACATTCGATAATATTTGTGGGTTGACTTTTGGCAAGGATCCGCAGACTCTCGCTCCTGAATTGCCCCACAACAGCTTTGCTATGGCTTTTGATCGAGCCACGGAAGCCACACTGTGTCGCTTTATTTTGCCTAGCTTTATATGGAAGCTAAAGAGATGGCTTCGGCTCGGGATGGAGGTGACCTTAACCCAAAGCCTCCACCATACGAATCAATACCTAACCAATATCATCGAGACGCGTAAGCTCGAGTTGTCCAGTCACCACCAGGTCAACAGTAGCCAAACCCCTCACGACGACTTGCTATCCAGATTCATGAAAAAGAAGGAATCCTATTCAGACACATTCCTCCAACACGTGGCACTCAACTTCATCCTAGCTGGCCGAGACACATCATCCGTCGCCCTCAGCTGGTTCTTCTGGCTAGTCATCAAAAACCCAAGAGTAGAGGAAAAAATCCTCACAGAAATCTGCACCGTCCTGTTGGAGACACGTGGCAAAGAGATATCCACGTGGACGGAAGAGCCATTGGAATTTGAAGAAGTGGATCGATTAATTTATCTCAAAGCCGCCATATCCGAAACTCTCCGACTCTACCCATCGGTGCCGGAAGATTCAAAACACGTAATAAACGACGACGTTTTACCCACCGGAACTTTTGTCCCCGCCAGCTCCTCCGTTACATATTCAATATATTCCATTGGTCGAATGAAATTCATTTGGGGAGAAGATTGTTTAGAATTCAAACCAGAGAGATGGTTGGTTACAAATGAAAACAAAATTGAGCTTCAAAATGCTTATAAATTTGTAGCCTTTAATGCCGGCCCAAGAATTTGTTTAGGAAAAGAATTGGCTTATTTACAAATGAAGTCGATTGCGGCCGCGGTCTTGCTCCGCCATCGCCTGACTTTAGTCGCCGGCCACCGTGTTGAGCAAAAGATGTCCTTGACGTTGTTCATGAAGTATGGTCTCAAAGTTCACTTGCATCCCAGAGATTTGGGGCTAGTGGTGGAGAAAATTAGCAAGAACACGGCGGAGACGGCGGCTGTGGCGGCGGATTGA 1605 46.6 MDGMVVAVVAAAVVTYMIWFLNIKRSLSGPRIWPLLGSLPGLIENSHRMHDWIAENLRSTGGTYQTCTCAIPFLTKKQGLVTVTCDPKNLEHILKTQFENYPKGPNWQDVFHDLLGDGIFNSDGNTWLFQRKTAALEFTTRTLRQAMARWVSRAIKSRFCPILESAQCQANSVDLQDLLLRLTFDNICGLTFGKDPQTLAPELPHNSFAMAFDRATEATLCRFILPSFIWKLKRWLRLGMEVTLTQSLHHTNQYLTNIIETRKLELSSHHQVNSSQTPHDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVIKNPRVEEKILTEICTVLLETRGKEISTWTEEPLEFEEVDRLIYLKAAISETLRLYPSVPEDSKHVINDDVLPTGTFVPASSSVTYSIYSIGRMKFIWGEDCLEFKPERWLVTNENKIELQNAYKFVAFNAGPRICLGKELAYLQMKSIAAAVLLRHRLTLVAGHRVEQKMSLTLFMKYGLKVHLHPRDLGLVVEKISKNTAETAAVAAD 534
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 41802119 41803723 - CrPI670011_09g022620.1 Cre09g2262 508930
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2262 534 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PANTHER CYTOCHROME P450 18 505 - -
Cre09g2262 534 CDD CYP86A 67 505 - -
Cre09g2262 534 SUPERFAMILY Cytochrome P450 20 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cre09g2262 534 Pfam Cytochrome P450 28 498 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 FunFam Cytochrome P450 21 515 - -
Cre09g2262 534 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cre09g2262 534 Gene3D Cytochrome P450 22 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0432 Cre-Chr9:4158133 Cre09g2262 Cre-Chr9:41802119 3.70E-129 dispersed
Cre09g2262 Cre-Chr9:41802119 Cre10g1354 Cre-Chr10:27166399 4.00E-122 dispersed
Cre03g0403 Cre-Chr3:2485801 Cre09g2262 Cre-Chr9:41802119 4.50E-195 transposed
Cre06g1131 Cre-Chr6:5176425 Cre09g2262 Cre-Chr9:41802119 1.60E-230 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2262 K15398 - csv:101216733 957.592