Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g2279 | ATGGCGACGGTGATTTCGGCCGTTGCAACCGCCGCGCCGTACCGGTTTAATTACCGGAGATTGTTTCAACGGCCTGCCGGAGCTCCGCCTCCACGGCTGGGTTTTCCGAAGCGTTTTCCATGGCGGTGTTTTGCAAAACAGAGCTCGAGAAGATTGCTGGCCATGAAGAAGAAGAAAAGTGAAGAAGATGAAGTGGTTAAGGAATTGAAGATGACTGTGCAGGAAAAAATGGCGACGAAGAAAGCGGAAAGAAATGCTTATTTGGTAGCTGCAATTGTTTCGAGCTTTGGGATCACTTCAATGGCCGCCATCGCTGTTTATTACAGATTCTCTTGGCAAATGGAGGGCAAAGAGTTTCCAATTTTGGAAATGTTCGGCACTTTTGCACTATCCATCGGCGCTGCTGTGGGAATGGAATTCTGGGCGAGATGGGCTCACAAAATGCTATGGCATGCTTCGTTATGGGATATGCACGAGTCTCATCATAGGGCGAGGGTTGGAGCTTTTGAATTGAACGATGTGTTTGCAATTATAAACGCTGTCCCAGCCATTGCTCTTCTTTCTTTTGGCTTCTTCAATCGAGGCTTCTTTCCCGGCCTCTGTTTTGGTGCCGGTTTGGGAATTACGGTGTTTGGGTTGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCTATAGCCGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATCCATCACACGGATAAATTCGACGGAGTTCCGTACGGTTTGTTTTTAGGACCCAAGGAATTGGAGGAAGTGGATGGCGAAGAAGAGCTGCAGAAGGAAATTAAAAAGAGAAGCAAGGGATGA | 861 | 49.13 | MATVISAVATAAPYRFNYRRLFQRPAGAPPPRLGFPKRFPWRCFAKQSSRRLLAMKKKKSEEDEVVKELKMTVQEKMATKKAERNAYLVAAIVSSFGITSMAAIAVYYRFSWQMEGKEFPILEMFGTFALSIGAAVGMEFWARWAHKMLWHASLWDMHESHHRARVGAFELNDVFAIINAVPAIALLSFGFFNRGFFPGLCFGAGLGITVFGLAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEEVDGEEELQKEIKKRSKG | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 41993938 | 41998196 | - | CrPI670011_09g022790.1 | Cre09g2279 | 508947 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g2279 | 286 | PANTHER | BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC | 54 | 285 | IPR045019 | GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre05g1024 | Cre-Chr5:9482647 | Cre09g2279 | Cre-Chr9:41993938 | 6.80E-91 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g2279 | K15746 | - | csv:101214325 | 466.848 |