Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g2389 | ATGGAAGAAGCTGCAGGTGGATCCGGATCAGGATTACCTGATCCATCTCAATTATTCGGAGTTTCCACACCGCCGCCGCCTTTAACCGTCGATGCCGCCATGAGTGATTCTCAGCAAGTCGAAGCTGCTTCTCCGATTAGTAGCCGACCTCCAGCAGTACCGTCTTCGTTAAATTATGAGGAACTCATTCGTCTCGGCGGCGGTGGCGGTGGTCAGATGGTGGTTGACGACGAAGAAACTGACCGTAGCGGCGGCGGAAGCGGTGGTAATCGGTGGCCGCGTCAGGAAACGCTTGCTTTGCTTAAAATTAGGTCAGAGATGGATTCCGCGTTTCGTGATGCTACACTTAAAGGACCTCTCTGGGATGAAGTCTCCAGGAAGTTAGGGGAAATGGGGTATAAGAGAAATGCAAAAAAATGCAAAGAGAAATTCGAGAATGTTCAAAAATATTACAAACGCACAAAAGAAGGAAGAGGAGGGCGTCAAGATGGCAAAACCTACAAATTCTTTACGCAACTTGAGGCTCTTCATAACGCAAACGTGGCGCCTTCTTCTTCTTCTTCATTCACACTGCCACAGCCCACCACCGTTGGCTTTGGGATTAGCAACCCTACTCCAATCTCATCCGTTAAAATTTCCACATCTTCTTCACAAAACCCAATGGGAATCTTTTCTCCTCCACCAGATCATTTCACTGTCCGGCCACCACCCACCGTCGCCGCTCCTATGGGTGTAAGCTTTTCGTCGAACACCTCATCTGCATCCACTGAAGACGATGATAACGATGAAGATGAAGACATGGGGTTTGATGTTGACCTTGAAGGGTTGCCGGAGAATGTAGCGGGTAGTAGTCGGAAGCGGCGGAGAGGGGTGGTTAAAGGAAATGAGTCAAGAACTCATAAGATGATGATGGAATTTTTCGAGGGTTTGATGAAACAGGTGATGGAGAAACAAGAAGTTATGCAACAGAAGTTTTTGGAAGCGATTGAAAAAAGAGAACAAGATAGGATGGTCAGAGAAGAGAATTGGAAAAGGCAAGAAATGGCTAGGTTGAGTCAAGAACAAGAAAGAATGGCTCAAGAACGGACAATTTCTGCTTCTAGAGATGCTGCCATTATTGCTTTTCTTCAGAAATTTACTGGCCAAACCATTCAATTTTCAGCCCCACAACAACAACAACAATTTGATGTGGCGCCTGTGCCTGTGGCTGTACCTGTATCCGTGGCTGTGTCTGTACCTATGCCTATGCCTGTGCCAGCGCCACTATCTCCTGTCCCCTCTCAGCCATTGCAACCACAAACTCTGCCACAGACGCCTTCAAATACAATCCCATTGGATCAACCAGTGTTTCAGGAAATTAGCCAAGGAGGAGGAGATGGATCTTCAGAACCCATTTCTTCAAGATGGCCAAAACAGGAAGTTCTAGCTTTAATAAAACTGAGAGGTGGGCTTGACGCCAGGTATCAAGAAACAGGTCCAAAGGGTCCTCTGTGGGAAGAGATTTCAGCTGGAATGGCACGGATGGGTTACAAGAGAAGTGCTAAAAGATGTAAAGAGAAATGGGAGAATATCAATAAGTATTTCAAGAAAGTTAAAGAAAGCAACAAAAAACGTCGTGAGGATTCCAAAACCTGCCCTTATTTCAATGAACTCGATGCTCTTTACCGCAAGAAAATCCTTTCTGCTTCTGCTTCTGATTCTGGTTCCTTTAGTGATACCAACAAATTTGAACAAAACCCAACAACAACAACAACAACAGATCTTCAACCTCAACCCCATTCTTCCATTCCTCAAGGTTTATCCGCTACTCTTTTTGGTGAAGGAACAGAAGAACAACCATCATCCACGAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTGCAGGACGACATCTACCGGCGTCATCTCGATCAAGATGATGACGACGAAAACGACGATTATTGCAGTGATGATGATGATGATTTACCACAAGAAAAGAGAAACAGTAACATTGATTATAAAATAGAGTTTCAAAGAAGAAACAATGTAGGAAACTCCAATGGCGTTGCGAGTGAGTTTCAATCAATGGCGGTGGTTCAATAG | 2085 | 45.13 | MEEAAGGSGSGLPDPSQLFGVSTPPPPLTVDAAMSDSQQVEAASPISSRPPAVPSSLNYEELIRLGGGGGGQMVVDDEETDRSGGGSGGNRWPRQETLALLKIRSEMDSAFRDATLKGPLWDEVSRKLGEMGYKRNAKKCKEKFENVQKYYKRTKEGRGGRQDGKTYKFFTQLEALHNANVAPSSSSSFTLPQPTTVGFGISNPTPISSVKISTSSSQNPMGIFSPPPDHFTVRPPPTVAAPMGVSFSSNTSSASTEDDDNDEDEDMGFDVDLEGLPENVAGSSRKRRRGVVKGNESRTHKMMMEFFEGLMKQVMEKQEVMQQKFLEAIEKREQDRMVREENWKRQEMARLSQEQERMAQERTISASRDAAIIAFLQKFTGQTIQFSAPQQQQQFDVAPVPVAVPVSVAVSVPMPMPVPAPLSPVPSQPLQPQTLPQTPSNTIPLDQPVFQEISQGGGDGSSEPISSRWPKQEVLALIKLRGGLDARYQETGPKGPLWEEISAGMARMGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFNELDALYRKKILSASASDSGSFSDTNKFEQNPTTTTTTDLQPQPHSSIPQGLSATLFGEGTEEQPSSTKPEDIVNELMELQDDIYRRHLDQDDDDENDDYCSDDDDDLPQEKRNSNIDYKIEFQRRNNVGNSNGVASEFQSMAVVQ | 694 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 43285516 | 43287841 | - | CrPI670011_09g023890.1 | Cre09g2389 | 509057 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g2389 | 694 | PANTHER | FI21293P1 | 68 | 564 | - | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 256 | 272 | - | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 564 | 601 | - | - | |
Cre09g2389 | 694 | FunFam | Trihelix transcription factor GT-2 | 92 | 153 | - | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 32 | 54 | - | - | |
Cre09g2389 | 694 | Gene3D | - | 92 | 153 | - | - | |
Cre09g2389 | 694 | Gene3D | - | 469 | 530 | - | - | |
Cre09g2389 | 694 | SMART | sant | 88 | 150 | IPR001005 | - | |
Cre09g2389 | 694 | SMART | sant | 465 | 527 | IPR001005 | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 67 | 94 | - | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 242 | 296 | - | - | |
Cre09g2389 | 694 | CDD | GT1 | 90 | 155 | - | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 637 | 664 | - | - | |
Cre09g2389 | 694 | Pfam | Myb/SANT-like DNA-binding domain | 467 | 554 | IPR044822 | - | |
Cre09g2389 | 694 | Pfam | Myb/SANT-like DNA-binding domain | 90 | 176 | IPR044822 | - | |
Cre09g2389 | 694 | ProSiteProfiles | Myb-like domain profile. | 461 | 525 | IPR001005 | - | |
Cre09g2389 | 694 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cre09g2389 | 694 | CDD | GT1 | 467 | 532 | - | - | |
Cre09g2389 | 694 | ProSiteProfiles | Myb-like domain profile. | 90 | 148 | IPR001005 | - | |
Cre09g2389 | 694 | FunFam | Trihelix transcription factor GT-2 | 469 | 530 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0978 | Cre-Chr1:15347219 | Cre09g2389 | Cre-Chr9:43285516 | 1.40E-38 | dispersed | |
Cre06g1739 | Cre-Chr6:15696391 | Cre09g2389 | Cre-Chr9:43285516 | 2.40E-41 | dispersed | |
Cre08g0330 | Cre-Chr8:10442483 | Cre09g2389 | Cre-Chr9:43285516 | 2.50E-94 | dispersed | |
Cre08g0332 | Cre-Chr8:10629697 | Cre09g2389 | Cre-Chr9:43285516 | 1.10E-74 | dispersed | |
Cre09g2389 | Cre-Chr9:43285516 | Cre10g2041 | Cre-Chr10:35130551 | 7.70E-41 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54451 | PF13837 | Myb_DNA-bind_4 | 5.50E-23 | CL0123 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g2389 | - | - | - | 0.0 |