Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g2485 ATGCCATCGGATCCGAACAATACGTTCCCTCTTCACCTTTTTTCAATCTTGATAAATGGCTTCGGATCCGAAGATTGCTGGCTTGTAATCTCTGGAAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGTATAACCCAGATAAGACGCCCGAGTTTGTGATTAAGATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA 417 41.01 MPSDPNNTFPLHLFSILINGFGSEDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44142096 44144044 + CrPI670011_09g024850.1 Cre09g2485 509153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g2485 138 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 40 47 IPR018506 GO:0020037(InterPro)
Cre09g2485 138 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 22 91 IPR036400 -
Cre09g2485 138 SMART Cyt_b5_2 9 85 IPR001199 -
Cre09g2485 138 Gene3D - 19 90 IPR036400 -
Cre09g2485 138 Pfam Cytochrome b5-like Heme/Steroid binding domain 22 84 IPR001199 -
Cre09g2485 138 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 24 85 IPR001199 -
Cre09g2485 138 FunFam Cytochrome b5 type B 19 89 - -
Cre09g2485 138 PRINTS Cytochrome B5 signature 44 58 IPR001199 -
Cre09g2485 138 PRINTS Cytochrome B5 signature 34 44 IPR001199 -
Cre09g2485 138 PRINTS Cytochrome B5 signature 72 84 IPR001199 -
Cre09g2485 138 PRINTS Cytochrome B5 signature 59 66 IPR001199 -
Cre09g2485 138 PANTHER CYTOCHROME B5 23 136 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0427 Cre-Chr5:3865275 Cre09g2485 Cre-Chr9:44142096 2.40E-47 dispersed
Cre06g1552 Cre-Chr6:10651270 Cre09g2485 Cre-Chr9:44142096 2.30E-42 dispersed
Cre07g0553 Cre-Chr7:3362635 Cre09g2485 Cre-Chr9:44142096 1.70E-42 dispersed
Cre08g0985 Cre-Chr8:22964277 Cre09g2485 Cre-Chr9:44142096 4.40E-22 dispersed
Cre09g2485 Cre-Chr9:44142096 Cre11g0703 Cre-Chr11:4117536 1.40E-10 dispersed
Cre05g0123 Cre-Chr5:1410014 Cre09g2485 Cre-Chr9:44142096 2.40E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g2485 K23490 - csv:101207109 239.195