Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0272 | ATGATGTCTCCTTTGGCCTTACCGAGAAATGGAGGCCCTGCCATTGCCATTGCCATTGCCATTGCCATTGCTAGGGCTTTGGTTCCTTGCTGGATCTCTCTTCATCCAACGGCGAAGAAGATAACAATGTCGTCGAACCATTCGGATTTGGAATCTTCAGCTTTTGATACTCAAACTTCGTCCAATCCGATTGCTCCCTTGGATCATCTTCCCTCCACCTCCTCCACCCTCTCTGAATCTGAAGAAAATCCCTGCACATCATCTTCGCCTTCCTCCACTCCACCTCCGATTCACCTACCTCTCTCTTGGCCTACCGATGCCACCCTTTCCCTCCAATGGATACACCATCTCATCGCCGCCTTCGACTGGTCTTCCAAAAATTTACCTCCATCCCAGTTTCCTTCCGTCCTTCCCGTCTCCGTTTTCGACACTCTAATCCTCACCGCTTCTAAAATCCTCCACAAAGAACCCAATTGCCTCAGAATCCTCCAAGACTCAGCCGCCAGCAGCGACTCGACTGTAGTCGTCGTCGGAGACATCCACGGCCAATTTCATGATCTCCTCTTTCTTCTGCAGGATGCTGGTTTTCCTTCTGAAAACCGCTTCTTTGTCTTCAATGGGGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTTTGCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGAGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTGCTAACCAAGTACGGAGACAAGGGTAAGCATGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATTGCTGGATGTGTATATACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCGTCTAAAAGGTCGAAAGGGAAAAAAAATCGTAGGATAATCTTAAATCCCGAAGCCAACGGGTTATCTCTTGGTTCTTTGGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATTCCGGGCGATGTGTTGTGGTCTGATCCCTCGATGAATCCTGGTCTCTCCCCAAATAAAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCAATCTGAAGCTAATTATTAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGCAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCAGGGAAACTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCAACTGAGGAGAGATACAAAAACAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCAATCATTCATAGTTTTGATGCCATTACTCCACGACCAAAGGTCAATGCATATTACGATTTTGAGGATGTAATTGATTCTGACGAAGAATTAGACTTGGCTTCAATGGCAACTGATCCATGA | 1512 | 46.1 | MMSPLALPRNGGPAIAIAIAIAIARALVPCWISLHPTAKKITMSSNHSDLESSAFDTQTSSNPIAPLDHLPSTSSTLSESEENPCTSSSPSSTPPPIHLPLSWPTDATLSLQWIHHLIAAFDWSSKNLPPSQFPSVLPVSVFDTLILTASKILHKEPNCLRILQDSAASSDSTVVVVGDIHGQFHDLLFLLQDAGFPSENRFFVFNGDYVDRGAWGLETFLLLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMNPGLSPNKERGIGLLWGPDCTEEFLKKFNLKLIIRSHEGPDAREKRPGLAGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATEERYKNKGAYIVLEPPNFDVPIIHSFDAITPRPKVNAYYDFEDVIDSDEELDLASMATDP | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1625814 | 1638297 | - | CrPI670011_10g002720.1 | Cre10g0272 | 509574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0272 | 503 | MobiDBLite | consensus disorder prediction | 51 | 88 | - | - | |
Cre10g0272 | 503 | MobiDBLite | consensus disorder prediction | 51 | 97 | - | - | |
Cre10g0272 | 503 | CDD | MPP_PP7 | 103 | 483 | IPR041754 | - | |
Cre10g0272 | 503 | Pfam | Calcineurin-like phosphoesterase | 173 | 399 | IPR004843 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | Gene3D | - | 131 | 491 | IPR029052 | - | |
Cre10g0272 | 503 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 71 | 495 | IPR051134 | - | |
Cre10g0272 | 503 | SMART | pp2a_7 | 137 | 473 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | SUPERFAMILY | Metallo-dependent phosphatases | 134 | 475 | IPR029052 | - | |
Cre10g0272 | 503 | FunFam | Serine/threonine-protein phosphatase | 121 | 497 | - | - | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 273 | 299 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 203 | 230 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 333 | 360 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 236 | 260 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 173 | 200 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | PRINTS | Serine/threonine phosphatase family signature | 427 | 443 | IPR006186 | GO:0016787(InterPro) | |
Cre10g0272 | 503 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 237 | 242 | IPR006186 | GO:0016787(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre01g0470 | Cre-Chr1:4062642 | Cre10g0272 | Cre-Chr10:1625814 | 5.60E-114 | dispersed | |
Cre10g0272 | Cre-Chr10:1625814 | Cre11g1709 | Cre-Chr11:28733063 | 3.40E-30 | dispersed | |
Cre10g0272 | Cre-Chr10:1625814 | Cre01g0257 | Cre-Chr1:1903699 | 2.10E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0272 | K04460 | - | csv:116402529 | 821.617 |