Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre10g0310 | ATGCTATCAAGCTTGATGAACTTCCTGAGGGCTTGCTGGCAGCCATGTGCCGATCATCTCTTGCGTCGTCGGGGCGGTGGTTCCGATTCGGTTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCAGCACATCAATGGAGAATTTTCAATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGTCAGCTTGAGTCTGGTCCCTTGAGCTTGCTAGAGTCTGGACCCTATGGAACCTTTATAGGAATATACGATGGCCATGGCGGCCCTGAGACATCGCGATTCATATGTGATAACTTGTTCCAGCATCTCAAAGTGTTCGCCACAGAAGAAAAGGAAATGTCAGTTAATGTGATAAAAAAAGCATTCCAAGCAACAGAAGAGGGGTTTCTCTCTATTGTCACCAAGCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGCTGTGATTTGTAATGGAAAACTCTACATTGCCAATCTTGGTGATTCCCGAGCTGTGTTGGGAAGGTTAGTTCGGTCCACGGGGGAAGTTCTTCCCATTCAGCTGTCATCGGAGCATAATGTAAGCATACAGTCAGTCCGCCAGGAGATGCAGTCTTTGCACCCAGATGACTCCCACATAGTAGTGCTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGATTTCTCGGTCAATCGGAGACGTATATCTCAAAAAGCCAGAATTTAACCGGGAGCCTTTGTATGCTAAGTTTCGCCTCCGAGAACCCTTCAGTAGGCCTATTTTGAGCTCAGAACCAGCAGTCTCTGTGCACGAACTAGATCCAAATGATCAATTTCTCATATTTGCCTCTGATGGGCTGTGGGAGCACCTTAGCAACCAGGATGCAGTTGATATAGTTCATAAGCATCCTCACAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCAATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATACTCGGATTTGAAGAAGATTGACCGTGGAGTTCGGCGCCATTTTCACGACGACACAACGGTGATAGTCGTGTTTCTTGGATCGAGCAGAGGGAGCAGCCCTGGTACAGCAGGGGAAGGGAGCCCTGTTTTGTCTGTGAGAGGGGGAGGAATGAACGTATCTGCAAAATCTCTAGCACCTTGA | 1179 | 48.26 | MLSSLMNFLRACWQPCADHLLRRRGGGSDSVGCQDGLLWYKDHGQHINGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFIGIYDGHGGPETSRFICDNLFQHLKVFATEEKEMSVNVIKKAFQATEEGFLSIVTKQWPMNPQIAAVGSCCLVAVICNGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNVSIQSVRQEMQSLHPDDSHIVVLKHNVWRVKGLIQISRSIGDVYLKKPEFNREPLYAKFRLREPFSRPILSSEPAVSVHELDPNDQFLIFASDGLWEHLSNQDAVDIVHKHPHSGSARRLVKAAMQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVFLGSSRGSSPGTAGEGSPVLSVRGGGMNVSAKSLAP | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1963380 | 1966013 | - | CrPI670011_10g003100.1 | Cre10g0310 | 509612 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre10g0310 | 392 | ProSitePatterns | PPM-type phosphatase domain signature. | 84 | 92 | IPR000222 | GO:0043169(InterPro) | |
Cre10g0310 | 392 | PANTHER | PROTEIN PHOSPHATASE | 43 | 357 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cre10g0310 | 392 | FunFam | Phosphatase 2C family protein | 39 | 366 | - | - | |
Cre10g0310 | 392 | MobiDBLite | consensus disorder prediction | 362 | 392 | - | - | |
Cre10g0310 | 392 | CDD | PP2Cc | 82 | 358 | IPR001932 | - | |
Cre10g0310 | 392 | Gene3D | - | 40 | 363 | IPR036457 | - | |
Cre10g0310 | 392 | SMART | PP2C_4 | 44 | 356 | IPR001932 | - | |
Cre10g0310 | 392 | SUPERFAMILY | PP2C-like | 62 | 359 | IPR036457 | - | |
Cre10g0310 | 392 | ProSiteProfiles | PPM-type phosphatase domain profile. | 50 | 358 | IPR001932 | - | |
Cre10g0310 | 392 | Pfam | Protein phosphatase 2C | 83 | 327 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1210 | Cre-Chr6:5983263 | Cre10g0310 | Cre-Chr10:1963380 | 8.00E-117 | dispersed | |
Cre10g0310 | Cre-Chr10:1963380 | Cre10g2183 | Cre-Chr10:36367698 | 2.50E-137 | dispersed | |
Cre10g0310 | Cre-Chr10:1963380 | Cre04g1677 | Cre-Chr4:35085522 | 1.30E-170 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre10g0310 | K01102 | - | csv:101220137 | 737.643 |