Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0369 ATGTGGGCCCAGGCTGTCCTCCGTGAGAATCAGCGAGTGATAGTGGAGTTGGAGAATGTTTTGTTTCTCAGTGTAACTGCAGAAATTAAGCGAGAATATGCTCTGTTCGGCGATATTTTAGGGATTTTGATTGCTGTTGCTGTTGGTTGTCATTGCTTAGTGGTGAAGAATTTTCTTGGCAGCCAAACAGTGTGCGGCGGATTTCAGTTCCATTTTCGGTGGATAAAAGCTTCGAGAGTAAAAAAAAGGCAAAACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATAAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGATTTTGACACAGCTTCAGAAGGGGTACCATACCCTTACATAGGAGGGGCAAGTGCAAGTTCAACTCCTGCTTGGGACTTCCCTCCTGTTAATCGGCACCCACATGTCAGATCTGAGTCTAGATTTAAAGGGACTTTCAGAGGAGATCAGACCCCTGGAGGCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCAAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGAGAGAACTATGATAGAATAACGGAGCTCTATAATGTCCAGAGATTCAATCAACAAGCTCTTCATACGCCACCGAGAACTGAGGACGGGAGGGATTCTTCATACTCAAAGATGGGAAGGGACAGTCCGATGACTTCCGCAAACAAAGATTGGACGCCGAGAAACTATAAACCTTCTGGAAGTAAAGGATTTCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCCCTATGCAGGCTCAAGTGCCTACCCAGCAGGCAGCACCAAAGGTGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAACCTTCCATTTCCATTAGCAATGCAAGCGACATCGAGGCAGAATGGGTCGAGGAAGATGAGCCGGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTTAGATTCAGCCGTGAAAGGTTCGGGGAAATGAACGCAAAGCAATGGTGGGAACACAACAGGGAGAGGATCCAAGCTCAATACCTATAA 1305 47.82 MWAQAVLRENQRVIVELENVLFLSVTAEIKREYALFGDILGILIAVAVGCHCLVVKNFLGSQTVCGGFQFHFRWIKASRVKKRQNDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHVRSESRFKGTFRGDQTPGGDSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSANKDWTPRNYKPSGSKGFPSDQHFDHGSSHPYAGSSAYPAGSTKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2478535 2485075 - CrPI670011_10g003690.1 Cre10g0369 509671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0369 434 PANTHER PROTEIN BREVIS RADIX-LIKE 1 82 434 IPR044532 -
Cre10g0369 434 MobiDBLite consensus disorder prediction 276 372 - -
Cre10g0369 434 MobiDBLite consensus disorder prediction 83 104 - -
Cre10g0369 434 Pfam Transcription factor regulating root and shoot growth via Pin3 378 433 IPR013591 -
Cre10g0369 434 Pfam Transcription factor regulating root and shoot growth via Pin3 215 269 IPR013591 -
Cre10g0369 434 MobiDBLite consensus disorder prediction 296 320 - -
Cre10g0369 434 Pfam Transcription factor BRX N-terminal domain 96 129 IPR027988 -
Cre10g0369 434 MobiDBLite consensus disorder prediction 345 372 - -
Cre10g0369 434 ProSiteProfiles BRX domain profile. 215 270 IPR013591 -
Cre10g0369 434 ProSiteProfiles BRX domain profile. 379 434 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0369 Cre-Chr10:2478535 Cre11g0652 Cre-Chr11:3624680 9.70E-50 dispersed
Cre10g0369 Cre-Chr10:2478535 Cre09g0079 Cre-Chr9:1071346 2.80E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0369 - - - 0.0