Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0436 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTCAAGCCGGAGACTCGCCCCGCCGCCCTTCCCGCCGACAATTCCGACATCCTCTTCTCCGCTTCCGAGCCACTTGACGAAACCCTAGGCCATTCCTTCTGCTACGTCCGCTCTTCCAACCGTTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCTCTTCGTTTTTCCCCTCCCCACGAACCGCCACTCGGTTCTAGGACTAGAACTGGCCCGCCGGAGACTGCCTTCAAGGCCATCTCGGGCGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTCTTATGCTTGATGCTGTTTACGACGATGCCACTGACACTACGCTTGGGGCTTCTGGTGGTGGTTGTGGAGTCAGAGGGAGTATTCTTAATGGCTTTGAGAGTACCTCTTCTTTTACTGCTCTTCCGCTTCAGCCCGTCCCCAGAGGTGGGACTGAGCCTTTGGAACGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCGCTGTCTGGTCCGCTCGATGCTAATGTTGATGGTGCTGGTGCTGGTGGTGCTGGCGCCGGCGCTGGTGGTGGCAGTGGCGGTGGTGGGAGAGTCCATTTCTCCGCTCCGCTTGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTCGTTGGCCGGAAGGAGAGCTCGACGGCGGGAGATGAGCCGGAGGTGAGGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCTGGAGAGGATCGGGTACATGTGGTTGTATCGGAAGAGCAAGGGTGGTTGTTCGTTGGAATTTATGATGGGTTCAATGGCCCGGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGACGATAATGAGGAGGCTGCTGCTGCTGCTAATTCGAACCCTTCGAATGTGGCTGAAGAGAGCACAGTCGGTGCGAATGAAACTAATGCTGACCCGTCCTCAAGAGCCGCTGGTCAAACCGTTGAAACTAACGGGAATGTTTCAGTAGTTGGAAATGAAGCGGAAGTGGAACAACCGGCTGCTGATCGAGGATCAGCAAAGAGGGTTACGTTTCAATCAGAGGATGTACCGGAGAACAGGCGGAGGCGGCGACTGTGGGAGTATTTAGCGGAGGACGATACACAGGACGGACTTGATCTCTCGGGGTCAGATAGGTTTGCATTTTCTGTTGATGACGCTCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGTTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTCATGTTAAGACTTTGTTCCCGTGGAAATATGGTTTGGGAGATAAAGAGAAGGCTGAGGCTGAGAATAGGGTGGAGGAGACATCATATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCATTGTCACGGGCTCTTGAGATAACTGAATTAGCATATTTGGACATGACAGATAAGTTGCTTGATACGAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTGCTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATCTGGGTGACAGCCGTGCAATTGTAGCACAGTATGAGCAACAAGAAGTTGGGCCTAGTGAAGACATGAAGGAGGTGGGCCTCAAAAGAACGGGCATGGAGGGTATAATTGAGGAGTCTACAACGAGTGAAGGGAAAATAACTCAAACGAATCAACCTTCAGCTCAGACGACGAGATTGACTGCATTGCAGCTATCCACTGATCATAGCACGAGCATTGAAGAAGAAGTAAGAAGAATAAAGAACGAGCACCCTGATGACAAACAGTGCATCGTCAACGATAGAGTGAAGGGCCGTCTAAAGGTTACGAGGGCATTTGGTGCAGGATTTTTGAAACAGCCAAAATTGAATGATGCATTACTGGAAATGTTTCGGAATGAGTATATTGGTACCGCACCATATTTATCATGCTTGCCTTCTCTTCGTCACCATAGACTCTGCCCGATGGATCAATTCATAGTGCTGTCATCTGATGGATTGTATCAATACCTAACCAATGAAGAAGTGGTTTCTTATGTTGAGAACTTTATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGATTTTCATGAATTGTTGGACATCCCACAGGGCGATCGAAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2439 48.95 MGSGVSSLFSCLKPETRPAALPADNSDILFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPPLGSRTRTGPPETAFKAISGASVSANSSIPRSVLMLDAVYDDATDTTLGASGGGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGAGAGGAGAGAGGGSGGGGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKESSTAGDEPEVRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAAAAANSNPSNVAEESTVGANETNADPSSRAAGQTVETNGNVSVVGNEAEVEQPAADRGSAKRVTFQSEDVPENRRRRRLWEYLAEDDTQDGLDLSGSDRFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGHVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQEVGPSEDMKEVGLKRTGMEGIIEESTTSEGKITQTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDALLEMFRNEYIGTAPYLSCLPSLRHHRLCPMDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3246203 3253029 - CrPI670011_10g004360.1 Cre10g0436 509738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0436 812 MobiDBLite consensus disorder prediction 64 88 - -
Cre10g0436 812 SUPERFAMILY PP2C-like 279 801 IPR036457 -
Cre10g0436 812 Gene3D - 252 807 IPR036457 -
Cre10g0436 812 SMART PP2C_4 267 798 IPR001932 -
Cre10g0436 812 PANTHER PROTEIN PHOSPHATASE 2C 275 800 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cre10g0436 812 Pfam Protein phosphatase 2C 633 763 IPR001932 -
Cre10g0436 812 CDD PP2Cc 512 800 IPR001932 -
Cre10g0436 812 MobiDBLite consensus disorder prediction 345 374 - -
Cre10g0436 812 ProSiteProfiles PPM-type phosphatase domain profile. 267 800 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre04g0912 Cre-Chr4:27800486 Cre10g0436 Cre-Chr10:3246203 2.80E-119 dispersed
Cre05g0741 Cre-Chr5:6587051 Cre10g0436 Cre-Chr10:3246203 8.20E-59 dispersed
Cre10g0436 Cre-Chr10:3246203 Cre10g2183 Cre-Chr10:36367698 2.00E-27 dispersed
Cre10g0436 Cre-Chr10:3246203 Cre02g2322 Cre-Chr2:36713279 4.80E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0436 - - - 0.0