Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0493 ATGGTTGGAGTAGAATCCAATCCATGGTCGATCGTCATTCCTGTTGATCAATCGCAGCTTCCATCGACTTCTTCTTTTCCGGCTGCCGGGACGGTGGCGACTTCTGTGAGAATTTCTTTACCTGTATTTCTTCCGTCGAGATCTTCTCCGATTTTTCCATTACTGGGGTTTGGTTTAGGAATGAATGTTAGGGGCTTTTTATTTGAGGCTATGTATATTGAGGAACTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGGAATTCAGGGGTTATTGTTAGTAATTTGGAGAGTCAGAGCATTGTTAGGTCTGATGTGAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTACCCGACTTTGCTTTACAATGTTTTTAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAAGGTTGATGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCTGATGTTCCCCGTTTGAAGGAGGTTGGCGTTCGAGGAGTGATAACACTAAATGAGCCATATGAGACTCTGGTTCCTTCAACGCTATATCGTGATCATGGAATTGATCATCTGACCATTCCGACAAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTCATCCACAAAAATGCATCACATGGACAGACTACATATGTTCACTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATTTGCTATCTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTATAAGCATGTGAAATCAATCAGGCCAAGGGTGCTTTTAGCATCATCACAGTGGCAGGCTGTCCTGGAATTCTACCACCTGATTGTGCAGAAGGATGTTTCCTTCTGCCACATAGATGATCTAGGAAAGGAACTATCAGGATCATCGCATGATCTTATCGCATTTGATGATAGTTCTGTAGTTGTTGTAAAAGAATCCGATCTAGATGGATATGACCAAAGTATCAGCCAAAGTGACATGGGTGATATCTGGGCAGATTTAAGTGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCTTGTTTGTGGCTCAGCTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTAGGCGTCGGGAAGGGCTGTTCACTTAGTGCTACTCATTTGGAAGGGTTCAGCGTGGACATCCATGTCTATTAA 1212 44.06 MVGVESNPWSIVIPVDQSQLPSTSSFPAAGTVATSVRISLPVFLPSRSSPIFPLLGFGLGMNVRGFLFEAMYIEELKEGELQSGEEGNSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPSTLYRDHGIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHLIVQKDVSFCHIDDLGKELSGSSHDLIAFDDSSVVVVKESDLDGYDQSISQSDMGDIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4054636 4058874 - CrPI670011_10g004930.1 Cre10g0493 509795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0493 403 FunFam Dual specificity phosphatase domain protein 138 285 - -
Cre10g0493 403 Gene3D Protein tyrosine phosphatase superfamily 138 288 IPR029021 -
Cre10g0493 403 ProSitePatterns Tyrosine specific protein phosphatases active site. 227 237 IPR016130 GO:0016311(InterPro)
Cre10g0493 403 Pfam Dual specificity phosphatase, catalytic domain 178 280 IPR000340 GO:0016311(InterPro)
Cre10g0493 403 SMART dsp_5 141 282 IPR020422 GO:0006470(InterPro)
Cre10g0493 403 CDD PTPMT1 138 280 IPR044596 GO:0004721(InterPro)
Cre10g0493 403 ProSiteProfiles Dual specificity protein phosphatase domain profile. 138 285 IPR020422 GO:0006470(InterPro)
Cre10g0493 403 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 206 274 IPR000387 GO:0016311(InterPro)
Cre10g0493 403 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 71 358 - -
Cre10g0493 403 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 132 284 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0493 Cre-Chr10:4054636 Cre11g0690 Cre-Chr11:4001455 1.70E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0493 - - - 0.0