Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre10g0506 ATGGAAGATTTTGCAATAATGAGTGGGTTGGTTGGAGTGCAATTTGTATATGCTGGCAACTCTGTTTTTATGAGTTTTCTTATGTCTTTGGGAATTCATCCTTCAACTCTTGTCATCTTCTCTACATTCTCCACTTTTCTCATTGTCTCTCCCATTGCTATTTATTTTGAAAGATATAACTGGCCAAAGAAACTTAGTCTAAAGTTGATTCTTCAGCTTCTTCTCATATCTTTTGGAGGGGTAACATTGTTTCAGTCCCTTTTTCTGAAAGGAATACAGCTAACATCGCCGACTTTAGCGACCGCGATGCCGAATCTCGCCCCGGGACTCATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAGAGTTCAGCTAAATTGCATCTATAGCAAGATCAAGATTTTAGGTACATTTCTATGTGTGGTTGGCGCCTTCACCATGAGCATAATGCACAGCGCGTCATCGGATGCAGCTGCAAAAGACAATATCCCACAAGAATCACCTCCGACCGAGCAAGTGTTCGATGAACAGAAGATCCTCGGTTGCGTGTATCTCTTCTCAGCGATCGTCGTTTTATCTAGCATAGTTGTTTTGCAGGCATCGACACTAGGGGATTTCCCAGCACCGATGTCGTTGTGTGCGATAACGTCTCTCATTGGAGTGCTATTAACCATAGGTGTACAGATAGTTGAATATCAGAAACTGGACATTGGTTGGCCACTTCTCAGTGTTAAGGAATTGGTTGCCTATTTTGTTGTAGGCGGAAGCATTAGTGGCGCTTGCGTGAGCTTCAACGGGTGGGCAATGAAGAAACGAGGGCCAGTTTTGGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCAGTTTTCACCTTGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACTGGCCTCTACTTCGTCCTGTGGGCGAAAGTGAAGGAGCGTTACGCCAACCGAAACCGTCCCGAGAAAACTTGA 1011 44.51 MEDFAIMSGLVGVQFVYAGNSVFMSFLMSLGIHPSTLVIFSTFSTFLIVSPIAIYFERYNWPKKLSLKLILQLLLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGLIFAIAWIFRLERVQLNCIYSKIKILGTFLCVVGAFTMSIMHSASSDAAAKDNIPQESPPTEQVFDEQKILGCVYLFSAIVVLSSIVVLQASTLGDFPAPMSLCAITSLIGVLLTIGVQIVEYQKLDIGWPLLSVKELVAYFVVGGSISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLGESINIGSLAGMFLMFTGLYFVLWAKVKERYANRNRPEKT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4243638 4245707 + CrPI670011_10g005060.1 Cre10g0506 509808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre10g0506 336 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020(InterPro)
Cre10g0506 336 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Cre10g0506 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 323 - -
Cre10g0506 336 PANTHER WAT1-RELATED PROTEIN 11 326 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre10g0506 Cre-Chr10:4243638 Cre10g1584 Cre-Chr10:29891533 2.80E-20 dispersed
Cre10g0506 Cre-Chr10:4243638 Cre09g2110 Cre-Chr9:40090575 2.40E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre10g0506 - - - 0.0